RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 PTBP2Q9UKA9 531 aaKnown RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ACACBO00763 2458 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 A0A1B0GX78 115 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 C9J4A7 227 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CLGNO14967 610 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 KLK8O60259 260 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CREG1O75629 220 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SCGB1D1O95968 90 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 IL1AP01583 271 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 IGHEP01854 428 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 EIF2S1P05198 315 aaKnown RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CAPN1P07384 714 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 GSTA1P08263 222 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 C1GALT1C1LP0DN25 315 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CDH1P12830 882 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ARSBP15848 533 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 GNAZP19086 355 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 GCAP28676 217 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 PTPN4P29074 926 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 AHRP35869 848 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CDH12P55289 794 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 VSNL1P62760 191 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CDC16Q13042 620 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 FAM53BQ14153 422 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ERV3-1Q14264 604 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 OR4D1Q15615 310 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 HIST2H2ACQ16777 129 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 KIF26BQ2KJY2 2108 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 DEFB110Q30KQ9 67 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 KRTAP21-3Q3LHN1 58 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 NKAIN1Q4KMZ8 207 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ATG9BQ674R7 924 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 HIST2H2AA3Q6FI13 130 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 FRMPD2BQ6IN97 320 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 NIPAL1Q6NVV3 410 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 TMEM81Q6P7N7 255 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 MBOAT1Q6ZNC8 495 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 MOB3CQ70IA8 216 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ZNF367Q7RTV3 350 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 LRRC70Q7Z2Q7 622 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ADCK2Q7Z695 626 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SYVN1Q86TM6 617 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ASPGQ86U10 573 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 VASH2Q86V25 355 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CENPLQ8N0S6 344 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SPATA6LQ8N4H0 392 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 CSNK1A1LQ8N752 337 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 NEXN-AS1Q8NBZ9 246 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 C11orf65Q8NCR3 313 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 TRPV3Q8NET8 790 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 METTL6Q8TCB7 284 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 UBTD2Q8WUN7 234 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 UBLCP1Q8WVY7 318 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SLC13A3Q8WWT9 602 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 PYCR2Q96C36 320 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 TM4SF19Q96DZ7 209 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 WDR34Q96EX3 536 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 IP6K3Q96PC2 410 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 GBP5Q96PP8 586 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 OR4K3Q96R72 315 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 MRPL57Q9BQC6 102 aaKnown RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 AIF1LQ9BQI0 150 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 PARD6BQ9BYG5 372 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ROPN1BQ9BZX4 212 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SLC26A1Q9H2B4 701 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ALG9Q9H6U8 611 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 AKIRIN1Q9H9L7 192 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 ROPN1Q9HAT0 212 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 WWOXQ9NZC7 414 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 PSMC3IPQ9P2W1 217 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 IL17BQ9UHF5 180 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 DCDC2Q9UHG0 476 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 NXT1Q9UKK6 140 aaKnown RBP2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SLC22A14Q9Y267 594 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 PADI2Q9Y2J8 665 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 SLC22A7Q9Y694 548 aa2.32□□□□□ -2.04
VPS13A-208ENST00000423463 APC2O95996 2303 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 ACACAQ13085 2346 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 IGLV3-12A0A075B6K2 115 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 URADA6NGE7 173 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 NCF1BA6NI72 391 aaPredicted RBP2.31□□□□□ -2.04
VPS13A-208ENST00000423463 FAM90A8PA6NJQ4 464 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 VSTM2BA6NLU5 285 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 NCF1CA8MVU1 366 aaPredicted RBP2.31□□□□□ -2.04
VPS13A-208ENST00000423463 SUPT3HB4E1H0 165 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 K7EPI3 171 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 GTPBP1O00178 669 aaKnown RBP2.31□□□□□ -2.04
VPS13A-208ENST00000423463 HAT1O14929 419 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 KCNAB3O43448 404 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 OR1F1O43749 312 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 LCMT2O60294 686 aaKnown RBP2.31□□□□□ -2.04
VPS13A-208ENST00000423463 SMIM24O75264 130 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 CDH16O75309 829 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 SUPT3HO75486 399 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 NGFRP08138 427 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 SERPINA6P08185 405 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 NUDT17P0C025 328 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 FAM90A13PP0C7W8 464 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 FAM90A24PP0C7X0 464 aa2.31□□□□□ -2.04
VPS13A-208ENST00000423463 UBL4AP11441 157 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms