RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 TMEM159Q96B96 161 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 FAM46AQ96IP4 442 aaKnown RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 ART5Q96L15 291 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 CHIAQ9BZP6 476 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 CFAP97Q9P2B7 532 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 COPS3Q9UNS2 423 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 PRELID3BQ9Y3B1 194 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 SLC5A10A0PJK1 596 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 POM121CA8CG34 1229 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 LRRN3E7EW58 273 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 AIPO00170 330 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 GSTZ1O43708 216 aaPredicted RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 SLC2A10O95528 541 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 ATP6V1E1P36543 226 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 FRKP42685 505 aaPredicted RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 PITPNAQ00169 270 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 GRM7Q14831 915 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 GPR68Q15743 365 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 ATRAIDQ6UW56 229 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 HSD17B13Q7Z5P4 300 aaPredicted RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 PXKQ7Z7A4 578 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 SLITRK4Q8IW52 837 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 FAM98AQ8NCA5 519 aaKnown RBP10.01□□□□□ -0.81
USP54-204ENST00000422491 OR51G2Q8NGK0 314 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 LINC01599Q8WXQ3 324 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 FCRL4Q96PJ5 515 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 ALG8Q9BVK2 526 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 LRRN3Q9H3W5 708 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 SUV39H2Q9H5I1 410 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 WDR26Q9H7D7 661 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 KCNK12Q9HB15 430 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 CA10Q9NS85 328 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 MED17Q9NVC6 651 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 MARCH5Q9NX47 278 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 NKIRAS2Q9NYR9 191 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 C5AR2Q9P296 337 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 B4GALT6Q9UBX8 382 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 PFDN2Q9UHV9 154 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 CLEC4AQ9UMR7 237 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 CA5BQ9Y2D0 317 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 BACE2Q9Y5Z0 518 aa10.01□□□□□ -0.81
USP54-204ENST00000422491 MCRIP1C9JLW8 97 aa10□□□□□ -0.81
USP54-204ENST00000422491 DNASE2O00115 360 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 PDCD5O14737 125 aa10□□□□□ -0.81
USP54-204ENST00000422491 ADAM12O43184 909 aa10□□□□□ -0.81
USP54-204ENST00000422491 GMDSO60547 372 aa10□□□□□ -0.81
USP54-204ENST00000422491 SELENOFO60613 162 aa10□□□□□ -0.81
USP54-204ENST00000422491 GALR3O60755 368 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 PRAF2O60831 178 aa10□□□□□ -0.81
USP54-204ENST00000422491 SC5DO75845 299 aa10□□□□□ -0.81
USP54-204ENST00000422491 NFYAP23511 347 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 PDHA2P29803 388 aa10□□□□□ -0.81
USP54-204ENST00000422491 CTSCP53634 463 aa10□□□□□ -0.81
USP54-204ENST00000422491 SIM1P81133 766 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 DGLUCYQ7Z3D6 616 aa10□□□□□ -0.81
USP54-204ENST00000422491 SLC9B2Q86UD5 537 aa10□□□□□ -0.81
USP54-204ENST00000422491 EIF4E3Q8N5X7 224 aaKnown RBP10□□□□□ -0.81
USP54-204ENST00000422491 FAM71CQ8NEG0 241 aa10□□□□□ -0.81
USP54-204ENST00000422491 OR4D9Q8NGE8 314 aa10□□□□□ -0.81
USP54-204ENST00000422491 COQ8AQ8NI60 647 aa10□□□□□ -0.81
USP54-204ENST00000422491 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
USP54-204ENST00000422491 ST8SIA2Q92186 375 aa10□□□□□ -0.81
USP54-204ENST00000422491 UPF1Q92900 1129 aaKnown RBP eCLIP10□□□□□ -0.81
USP54-204ENST00000422491 DMRTA2Q96SC8 542 aa10□□□□□ -0.81
USP54-204ENST00000422491 NPAS1Q99742 590 aa10□□□□□ -0.81
USP54-204ENST00000422491 DPH7Q9BTV6 452 aa10□□□□□ -0.81
USP54-204ENST00000422491 SGPP1Q9BX95 441 aa10□□□□□ -0.81
USP54-204ENST00000422491 TMPRSS13Q9BYE2 586 aa10□□□□□ -0.81
USP54-204ENST00000422491 OR51I1Q9H343 314 aa10□□□□□ -0.81
USP54-204ENST00000422491 AUNIPQ9H7T9 357 aa10□□□□□ -0.81
USP54-204ENST00000422491 HINT3Q9NQE9 182 aaKnown RBP10□□□□□ -0.81
USP54-204ENST00000422491 IL20Q9NYY1 176 aa10□□□□□ -0.81
USP54-204ENST00000422491 ZMAT5Q9UDW3 170 aaKnown RBP10□□□□□ -0.81
USP54-204ENST00000422491 GMEB2Q9UKD1 530 aa10□□□□□ -0.81
USP54-204ENST00000422491 MRPS7Q9Y2R9 242 aaKnown RBP10□□□□□ -0.81
USP54-204ENST00000422491 NUP210Q8TEM1 1887 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 A0A1B0GUH1 482 aa10□□□□□ -0.81
USP54-204ENST00000422491 GREM1O60565 184 aa10□□□□□ -0.81
USP54-204ENST00000422491 TBX19O60806 448 aa10□□□□□ -0.81
USP54-204ENST00000422491 LDOC1O95751 146 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 NR2F1P10589 423 aa10□□□□□ -0.81
USP54-204ENST00000422491 IFNGR2P38484 337 aa10□□□□□ -0.81
USP54-204ENST00000422491 VEGFCP49767 419 aa10□□□□□ -0.81
USP54-204ENST00000422491 ERVK-21P61565 698 aa10□□□□□ -0.81
USP54-204ENST00000422491 TSTA3Q13630 321 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 HLXQ14774 488 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 PGGHGQ32M88 737 aa10□□□□□ -0.81
USP54-204ENST00000422491 TMEM255AQ5JRV8 349 aa10□□□□□ -0.81
USP54-204ENST00000422491 B3GNTL1Q67FW5 361 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 HIST2H2AA3Q6FI13 130 aa10□□□□□ -0.81
USP54-204ENST00000422491 MTFR2Q6P444 385 aa10□□□□□ -0.81
USP54-204ENST00000422491 ALKAL2Q6UX46 152 aa10□□□□□ -0.81
USP54-204ENST00000422491 ESPNLQ6ZVH7 1005 aa10□□□□□ -0.81
USP54-204ENST00000422491 GET4Q7L5D6 327 aaPredicted RBP10□□□□□ -0.81
USP54-204ENST00000422491 SPICQ8N5J4 248 aa10□□□□□ -0.81
USP54-204ENST00000422491 ACBD7Q8N6N7 88 aa10□□□□□ -0.81
USP54-204ENST00000422491 CLRN3Q8NCR9 226 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms