RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 C10orf107Q8IVU9 208 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 C4orf33Q8N1A6 199 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 CEP70Q8NHQ1 597 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 EPS8L3Q8TE67 593 aaKnown RBP12.74□□□□□ -0.37
LINC01006-202ENST00000418309 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 PPCDCQ96CD2 204 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF845Q96IR2 970 aaPredicted RBP12.74□□□□□ -0.37
LINC01006-202ENST00000418309 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 TSSK3Q96PN8 268 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 PRRG4Q9BZD6 226 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 OPN3Q9H1Y3 402 aaPredicted RBP12.74□□□□□ -0.37
LINC01006-202ENST00000418309 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 PPCSQ9HAB8 311 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 MID2Q9UJV3 735 aa12.74□□□□□ -0.37
LINC01006-202ENST00000418309 MAP1AP78559 2803 aaPredicted RBP12.74□□□□□ -0.37
LINC01006-202ENST00000418309 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 NDUFB5O43674 189 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 TRIM13O60858 407 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 POU2F1P14859 743 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 PRPH2P23942 346 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 KIR2DL2P43627 348 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 PRR5P85299 388 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 PON3Q15166 354 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 GALNTL6Q49A17 601 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 APOOLQ6UXV4 268 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 TDRPQ86YL5 185 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 DDIASQ8IXT1 998 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 CLHC1Q8NHS4 586 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 FNDC9Q8TBE3 224 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 ZBED6CLQ96FA7 236 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 CCT7Q99832 543 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 MED18Q9BUE0 208 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 GATA5Q9BWX5 397 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 GSX1Q9H4S2 264 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF226Q9NYT6 803 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-202ENST00000418309 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 VDAC3Q9Y277 283 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF175Q9Y473 711 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
LINC01006-202ENST00000418309 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 EMC8O43402 210 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 IFI6P09912 130 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 NEFHP12036 1026 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 HPGDP15428 266 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 SDC1P18827 310 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 CD53P19397 219 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 RPL38P63173 70 aaKnown RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 RFTN2Q52LD8 501 aaPredicted RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 FIGNL1Q6PIW4 674 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 Q6ZSR9 355 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 ZNF610Q8N9Z0 462 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 WFDC11Q8NEX6 87 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 PIK3IP1Q96FE7 263 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 BEX4Q9NWD9 120 aaPredicted RBP12.72□□□□□ -0.37
LINC01006-202ENST00000418309 ELOVL5Q9NYP7 299 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 PROCRQ9UNN8 238 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 ZFHX3Q15911 3703 aa12.72□□□□□ -0.37
LINC01006-202ENST00000418309 ACANP16112 2415 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 NPIPB8E9PQR5 432 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 NKX2-2O95096 273 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 PLGP00747 810 aaPredicted RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 ALOX5P09917 674 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 FOSL1P15407 271 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 UGT2B10P36537 528 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 ASMTP46597 345 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 SLC18A2Q05940 514 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 FGFBP1Q14512 234 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 PCLAFQ15004 111 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 R3HCC1LQ7Z5L2 792 aaKnown RBP12.71□□□□□ -0.37
LINC01006-202ENST00000418309 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 SLC16A11Q8NCK7 471 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 OR4C3Q8NH37 302 aa12.71□□□□□ -0.37
LINC01006-202ENST00000418309 JADE3Q92613 823 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms