RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RASAL1O95294 804 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 DBHP09172 617 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SQSTM1Q13501 440 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PIGGQ5H8A4 983 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 TSPEARQ8WU66 669 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SAMD8Q96LT4 415 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 NPIPB15A6NHN6 443 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PRLP01236 227 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 GABRR1P24046 479 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PTH2RP49190 550 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RRAS2P62070 204 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RUNX2Q13950 521 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ERV3-1Q14264 604 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 HAGHLQ6PII5 290 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MCATQ8IVS2 390 aaKnown RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 APIPQ96GX9 242 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 CDC14CA4D256 554 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ICAM2P13598 275 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RPS3P23396 243 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PIGFQ07326 219 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SPHARQ15513 63 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MORN1Q5T089 497 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 OR4K15Q8NH41 348 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PLEKHO2Q8TD55 490 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM40Q8WWA1 233 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 OR6C1Q96RD1 312 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 POLE4Q9NR33 117 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 CREBL2O60519 120 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RAD1O60671 282 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ZFAND5O76080 213 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 NUDT1P36639 197 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 HTR3AP46098 478 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MAP4K2Q12851 820 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PDZD3Q86UT5 571 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SENP5Q96HI0 755 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 INPP5KQ9BT40 448 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SACM1LQ9NTJ5 587 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SOBPA7XYQ1 873 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PCDH17O14917 1159 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SLC35E2BP0CK96 405 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF45Q02386 682 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 NPWQ8N729 165 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 WDSUB1Q8N9V3 476 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 OR52E1Q8NGJ3 308 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 TWSG1Q9GZX9 223 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RLIMQ9NVW2 624 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PHIPQ8WWQ0 1821 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SERPINA5P05154 406 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 IL20RBQ6UXL0 311 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 IQCF1Q8N6M8 205 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 HDAC2Q92769 488 aaKnown RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RAB39BQ96DA2 213 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MAGIXQ9H6Y5 334 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 PREBQ9HCU5 417 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM100Q9NV29 134 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SLC35A3Q9Y2D2 325 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MT-CO2P00403 227 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF14P17017 642 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ARSDP51689 593 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 RRADP55042 308 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 C9orf135Q5VTT2 229 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 FAM43BQ6ZT52 329 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 TPRA1Q86W33 373 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 SLC35F2Q8IXU6 374 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 MRPL43Q8N983 215 aaKnown RBP10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ERVK13-1Q9NX77 482 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 ATPIF1Q9UII2 106 aa10.59□□□□□ -0.71
PTCH1-205ENST00000418258 NUDT21O43809 227 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 LILRB5O75023 590 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 STSP08842 583 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 CHMP24386 653 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF423Q2M1K9 1284 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 XKR5Q6UX68 686 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 BPHLQ86WA6 291 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 SIAH1Q8IUQ4 282 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TBC1D20Q96BZ9 403 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 MSI2Q96DH6 328 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 CUEDC1Q9NWM3 386 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 HIF1ANQ9NWT6 349 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TAAR2Q9P1P5 351 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 HES5Q5TA89 166 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR51Q1Q8NH59 317 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 DECR2Q9NUI1 292 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RP1P56715 2156 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 H0YAE9 185 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms