RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ARHGDIAP52565 204 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 LSM11P83369 360 aaKnown RBP eCLIP15.68■□□□□ 0.1
CALD1-204ENST00000417172 LARS2Q15031 903 aaKnown RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 SLC36A3Q495N2 470 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 SLC5A8Q8N695 610 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 ATG16L2Q8NAA4 619 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 OR4C3Q8NH37 302 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 PHF10Q8WUB8 498 aaKnown RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 METTL21AQ8WXB1 218 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 WWTR1Q9GZV5 400 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 MAN2C1Q9NTJ4 1040 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 KIF17Q9P2E2 1029 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 COPS7AQ9UBW8 275 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 ACAD8Q9UKU7 415 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 ZNF232Q9UNY5 417 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 C2orf92A0A1B0GVN3 265 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 SPAARA0A1B0GVQ0 90 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 ALBP02768 609 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 THBS1P07996 1170 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 CYP4B1P13584 511 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 PPICP45877 212 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 RGS8P57771 180 aaPredicted RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 LIN52Q52LA3 116 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 C3orf38Q5JPI3 329 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 KDM4DQ6B0I6 523 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 PAPD4Q6PIY7 484 aaKnown RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 ZNF517Q6ZMY9 492 aaPredicted RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 TIPARPQ7Z3E1 657 aaKnown RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 MARVELD2Q8N4S9 558 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 DHRSXQ8N5I4 330 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 APCDD1LQ8NCL9 501 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 NFAM1Q8NET5 270 aaPredicted RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 OR10G2Q8NGC3 310 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 GIPC3Q8TF64 312 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 LIN37Q96GY3 246 aaPredicted RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 LRFN5Q96NI6 719 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 ALPK1Q96QP1 1244 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 FEVQ99581 238 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 Q9H521 79 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 FOXJ2Q9P0K8 574 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 GPN3Q9UHW5 284 aaPredicted RBP15.68■□□□□ 0.1
CALD1-204ENST00000417172 EXPH5Q8NEV8 1989 aa15.68■□□□□ 0.1
CALD1-204ENST00000417172 CDHR4A6H8M9 788 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 SAGE2PA6NJ88 616 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 C9orf172C9J069 976 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 H1F0P07305 194 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 UMODP07911 640 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 POU2F1P14859 743 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 PTNP21246 168 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 ELAVL4P26378 380 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 EPHA2P29317 976 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 CAPGP40121 348 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 NR0B1P51843 470 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 ZNF136P52737 540 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 ADARB1P78563 741 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 KCNAB2Q13303 367 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 MICAQ29983 383 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 NDUFAF6Q330K2 333 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 COLEC12Q5KU26 742 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 FAHD1Q6P587 224 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 UGT2A3Q6UWM9 527 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 TAGAPQ8N103 731 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 MORN4Q8NDC4 146 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 THAP3Q8WTV1 239 aaPredicted RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 NRBF2Q96F24 287 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 LCORQ96JN0 433 aaPredicted RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 DHRS1Q96LJ7 313 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 NIPSNAP1Q9BPW8 284 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 ANKRD60Q9BZ19 345 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 CACYBPQ9HB71 228 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 POLE3Q9NRF9 147 aa15.67■□□□□ 0.1
CALD1-204ENST00000417172 PTRH2Q9Y3E5 179 aaKnown RBP15.67■□□□□ 0.1
CALD1-204ENST00000417172 PLD2O14939 933 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 KLF7O75840 302 aaPredicted RBP15.66■□□□□ 0.1
CALD1-204ENST00000417172 HMGA2P52926 109 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 RAB15P59190 212 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 NCF4Q15080 339 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 CPEB2Q7Z5Q1 589 aaKnown RBP15.66■□□□□ 0.1
CALD1-204ENST00000417172 B3GNT7Q8NFL0 401 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 SLC7A13Q8TCU3 470 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 CNOT9Q92600 299 aaKnown RBP15.66■□□□□ 0.1
CALD1-204ENST00000417172 ART5Q96L15 291 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 PRRC1Q96M27 445 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 TRIM45Q9H8W5 580 aaPredicted RBP15.66■□□□□ 0.1
CALD1-204ENST00000417172 KLHL28Q9NXS3 571 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 PCDHGA1Q9Y5H4 931 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 FRG2CA6NGY1 282 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 NPIPB9F8W1W9 429 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 ADAM11O75078 769 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 THY1P04216 161 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 TAS2R41P59536 307 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 RPS18P62269 152 aaKnown RBP15.66■□□□□ 0.1
CALD1-204ENST00000417172 ENTPD8Q5MY95 495 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 RNF220Q5VTB9 566 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 TMEM205Q6UW68 189 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 GATSQ8NAP1 163 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 GATA6Q92908 595 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 TAAR9Q96RI9 348 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 MCHR1Q99705 422 aa15.66■□□□□ 0.1
CALD1-204ENST00000417172 PRRX2Q99811 253 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms