RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RAB3BP20337 219 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 RFX3P48380 749 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 TAS2R50P59544 299 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 PSMA6P60900 246 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 HLXQ14774 488 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 SFXN4Q6P4A7 337 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 SYT9Q86SS6 491 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 TSPAN33Q86UF1 283 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 THOC6Q86W42 341 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 KRT78Q8N1N4 520 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 CRIPAKQ8N1N5 446 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 IL17RCQ8NAC3 791 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 PDXPQ96GD0 296 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 RSPO3Q9BXY4 272 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 WDR26Q9H7D7 661 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 FGF20Q9NP95 211 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 CD84Q9UIB8 345 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 EDARQ9UNE0 448 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 H7C4K7 107 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARPC1BO15143 372 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 PGRMC2O15173 223 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 KLKB1P03952 638 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 NPR2P20594 1047 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 ATP5C1P36542 298 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 HOXA1P49639 335 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF155Q12901 538 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 ELP2Q6IA86 826 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 TRMT11Q7Z4G4 463 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 PM20D2Q8IYS1 436 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 HORMAD2Q8N7B1 307 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR51B5Q9H339 312 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 CNIH4Q9P003 139 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 RNF215Q9Y6U7 377 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 LINC00587B1AMM8 73 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 D6RAR5 112 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 CHST10O43529 356 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 RGS9O75916 674 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SNRPBP14678 240 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARF5P84085 180 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 MC2RQ01718 297 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC3A1Q07837 685 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 CAMK1Q14012 370 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 NUMA1Q14980 2115 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 MINDY4Q4G0A6 757 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 TXNDC8Q6A555 127 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC27A4Q6P1M0 643 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SERPINA13PQ6UXR4 307 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLITRK4Q8IW52 837 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR51G2Q8NGK0 314 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 MRPS24Q96EL2 167 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 BHLHE41Q9C0J9 482 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SMG9Q9H0W8 520 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 MCRIP1C9JLW8 97 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 HOXA2O43364 376 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC28A2O43868 658 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 ATG12O94817 140 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 NTN1O95631 604 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 RAD52P43351 418 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 PTSQ03393 145 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 GPR33Q49SQ1 333 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 BBS1Q8NFJ9 593 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 C2CD4CQ8TF44 421 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 ASB11Q8WXH4 323 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 THAP4Q8WY91 577 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 UBL7Q96S82 380 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 MIEF1Q9NQG6 463 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 NTMQ9P121 344 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 RCE1Q9Y256 329 aa13.78□□□□□ -0.2
NCKIPSD-204ENST00000416649 PLSCR5A0PG75 271 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 FAM183AA6NL82 134 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 ANHXE9PGG2 379 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 SIGLEC6O43699 453 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 PIP5K1CO60331 668 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 S100A11P31949 105 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 NSG1P42857 185 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF763Q0D2J5 394 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 LIPJQ5W064 366 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 VASNQ6EMK4 673 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 SPRED2Q7Z698 418 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMPRSS11BQ86T26 416 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR4D9Q8NGE8 314 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 TRIM43Q96BQ3 446 aaPredicted RBP13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 GINS4Q9BRT9 223 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 NKX6-2Q9C056 277 aaPredicted RBP13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 MTG2Q9H4K7 406 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 ISYNA1Q9NPH2 558 aa13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 ING1Q9UK53 422 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms