RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GATSQ8NAP1 163 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 NUP43Q8NFH3 380 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 OR7A2PQ8NGA2 310 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 DUSP19Q8WTR2 217 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 FAM222BQ8WU58 562 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 FIG4Q92562 907 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 C1GALT1C1Q96EU7 318 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 C16orf58Q96GQ5 468 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 MS4A4EQ96PG1 132 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 TM9SF2Q99805 663 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SFXN3Q9BWM7 321 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 IQCGQ9H095 443 aaKnown RBP13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 A0A1W2PNV4 684 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 LYPLA1O75608 230 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 OXSR1O95747 527 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ANGPTL1O95841 491 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 LAMP1P11279 417 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 CCKARP32238 428 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 GPC1P35052 558 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ART1P52961 327 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 PRKAG1P54619 331 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 PRR5P85299 388 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 SORDQ00796 357 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ZNHIT3Q15649 155 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 CCNJQ5T5M9 372 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 CDC20BQ86Y33 519 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 KRTCAP2Q8N6L1 136 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 OR4C3Q8NH37 302 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 GPR151Q8TDV0 419 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 CAVIN3Q969G5 261 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 FAM120BQ96EK7 910 aaKnown RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ZBED6CLQ96FA7 236 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ZNF845Q96IR2 970 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ZFP3Q96NJ6 502 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 YIPF4Q9BSR8 244 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ZNF395Q9H8N7 513 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ACSS1Q9NUB1 689 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 ATP6V1HQ9UI12 483 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 FOXD3Q9UJU5 478 aaPredicted RBP13.62□□□□□ -0.23
UBXN4-203ENST00000416538 PLEKHA6Q9Y2H5 1048 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 TMED5Q9Y3A6 229 aa13.62□□□□□ -0.23
UBXN4-203ENST00000416538 TUBAL3A6NHL2 446 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 ALG1L2C9J202 215 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 H3BML4 177 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 SEC14L5O43304 696 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 PEX11AO75192 247 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 KCNK2O95069 426 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 CHEK2O96017 543 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 BPGMP07738 259 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 MANFP55145 182 aaKnown RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 ZNF844Q08AG5 666 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 IFFO1Q0D2I5 559 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 GANABQ14697 944 aaKnown RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 CD226Q15762 336 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 WDR93Q6P2C0 686 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 GGNQ86UU5 652 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 CDRT4Q8N9R6 151 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 RBM24Q9BX46 236 aaKnown RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 TBL1XR1Q9BZK7 514 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
UBXN4-203ENST00000416538 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
UBXN4-203ENST00000416538 SETD2Q9BYW2 2564 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 NPIPA5A0A0B4J1W7 369 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 SLC22A20A6NK97 555 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 NPIPA7E9PJI5 369 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 EMC8O43402 210 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 OIP5O43482 229 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 ITM2AO43736 263 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 KCNH1O95259 989 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 SLU7O95391 586 aaKnown RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 NPIPA8P0DM63 369 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 PEPDP12955 493 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 PEX19P40855 299 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 ASMTP46597 345 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 RNF144AP50876 292 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 LASP1Q14847 261 aaKnown RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 C6orf136Q5SQH8 315 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 MREGQ8N565 214 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 FNDC9Q8TBE3 224 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 STARD4Q96DR4 205 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 PPP3R2Q96LZ3 170 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 TMEM109Q9BVC6 243 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 PINK1Q9BXM7 581 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms