RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CHRNGP07510 517 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 BCKDHAP12694 445 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 MAPK1P28482 360 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 IFFO1Q0D2I5 559 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 GRAMD1BQ3KR37 738 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 UGT3A2Q3SY77 523 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 OR6Y1Q8NGX8 325 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 CLHC1Q8NHS4 586 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 PIK3R3Q92569 461 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 SLC9A6Q92581 669 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 PPP3R2Q96LZ3 170 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 DACH2Q96NX9 599 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 YIPF4Q9BSR8 244 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 CXXC4Q9H2H0 198 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 GALNT8Q9NY28 637 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 SLC17A7Q9P2U7 560 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 LGALS13Q9UHV8 139 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 SLC22A20A6NK97 555 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 TMEM114B3SHH9 223 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 MSTNO14793 375 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 TNFSF13O75888 250 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 LCN1P31025 176 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 SERPINB5P36952 375 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 RPL3P39023 403 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 SUCLG1P53597 346 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 CLDN15P56746 228 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 RPS3AP61247 264 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 APOOLQ6UXV4 268 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 SZRD1Q7Z422 152 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 CHDHQ8NE62 594 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 FAM110BQ8TC76 370 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 TCP10LQ8TDR4 215 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 GIMAP5Q96F15 307 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 MS4A4EQ96PG1 132 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 MECRQ9BV79 373 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 STOML1Q9UBI4 398 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 NDRG3Q9UGV2 375 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 ATP6V1HQ9UI12 483 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 PLEKHA6Q9Y2H5 1048 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 AP4B1Q9Y6B7 739 aa15.87■□□□□ 0.13
PDLIM2-208ENST00000416159 TMEM233B4DJY2 109 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 ALG1L2C9J202 215 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 H3BML4 177 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 SEC14L5O43304 696 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 SPAG7O75391 227 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 NGFRP08138 427 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 ALOX5P09917 674 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 ACP2P11117 423 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 HPCAL1P37235 193 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 PCYT1AP49585 367 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 PRIM2P49643 509 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 VSNL1P62760 191 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 OCRLQ01968 901 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 MLC1Q15049 377 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 CAMKMTQ7Z624 323 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 EXOC3L1Q86VI1 746 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 OR5M1Q8NGP8 315 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 FIG4Q92562 907 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 PINK1Q9BXM7 581 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 ZNF175Q9Y473 711 aa15.86■□□□□ 0.13
PDLIM2-208ENST00000416159 C2CD3Q4AC94 2353 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 SH3D21A4FU49 640 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 CASKO14936 926 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 NDUFB5O43674 189 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 PEX11AO75192 247 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 KCNK2O95069 426 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 OXSR1O95747 527 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 HSPA4LO95757 839 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 TBXA2RP21731 343 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 ATP6AP1LQ52LC2 224 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 XKR7Q5GH72 579 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 MFSD12Q6NUT3 480 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 ZCCHC23Q6ZST2 131 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 NATD1Q8N6N6 113 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 METTL25Q8N6Q8 603 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 CNEP1R1Q8N9A8 125 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 SLC16A11Q8NCK7 471 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 OR4C3Q8NH37 302 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 STARD4Q96DR4 205 aa15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 NUP214P35658 2090 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-208ENST00000416159 A0A087WZY1 265 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 A0A1W2PRB8 838 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 H0YC42 278 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 SCAMP2O15127 329 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 LYPLA1O75608 230 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 SMNDC1O75940 238 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 HPGDP15428 266 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 SERPINB4P48594 390 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 TPD52P55327 224 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 CLDN20P56880 219 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 FGFBP1Q14512 234 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 DUSP5Q16690 384 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 TMEM44Q2T9K0 475 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 EXOSC6Q5RKV6 272 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 VWA1Q6PCB0 445 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms