RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PRR5P85299 388 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 MAD2L1Q13257 205 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-207ENST00000413642 COX18Q8N8Q8 333 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 GATSQ8NAP1 163 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 CDS1Q92903 461 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 CHMP6Q96FZ7 201 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 LURAP1Q96LR2 239 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 PRPF18Q99633 342 aaKnown RBP23.83■■□□□ 1.41
VEGFA-207ENST00000413642 CALHM2Q9HA72 323 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 KCNE3Q9Y6H6 103 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 PKDREJQ9NTG1 2253 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 MED12Q93074 2177 aa23.83■■□□□ 1.41
VEGFA-207ENST00000413642 MBD3L4A6NDZ8 208 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 MBD3L3A6NE82 208 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 MBD3L5A6NJ08 208 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 ZNF708P17019 499 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 SSTR2P30874 369 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 PRIM2P49643 509 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 MAGOHP61326 146 aaKnown RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 TLE4Q04727 773 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 TP53BP2Q13625 1128 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 RCAN2Q14206 197 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 SF3B4Q15427 424 aaKnown RBP eCLIP23.82■■□□□ 1.42e-10■■■□□ 18
VEGFA-207ENST00000413642 SPDYE7PQ495Y7 208 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 OR4F3Q6IEY1 312 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 AAGABQ6PD74 315 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 LURAP1LQ8IV03 231 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 CLECL1Q8IZS7 167 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 OR5AK3PQ8NH89 298 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 MBD3L2Q8NHZ7 208 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 PSMA8Q8TAA3 256 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 C14orf79Q96F83 325 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 BHLHE41Q9C0J9 482 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-207ENST00000413642 TMBIM4Q9HC24 238 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 KIAA1549Q9HCM3 1950 aa23.82■■□□□ 1.4
VEGFA-207ENST00000413642 CLCA1A8K7I4 914 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 SHISA8B8ZZ34 492 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 CFLARO15519 480 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 ERLIN1O75477 346 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 OXSR1O95747 527 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-207ENST00000413642 CHMP24386 653 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 C21orf58P58505 322 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 FOXF2Q12947 444 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.81■■□□□ 1.4
VEGFA-207ENST00000413642 SMU1Q2TAY7 513 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 LSM12Q3MHD2 195 aaKnown RBP23.81■■□□□ 1.4
VEGFA-207ENST00000413642 RAET1LQ5VY80 246 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 ZCCHC12Q6PEW1 402 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 CLEC4FQ8N1N0 589 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 GPATCH2Q9NW75 528 aa23.81■■□□□ 1.4
VEGFA-207ENST00000413642 H0YC42 278 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 DVL2O14641 736 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 TPD52P55327 224 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-207ENST00000413642 HBA1P69905 142 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 POU6F2P78424 691 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-207ENST00000413642 C17orf67Q0P5P2 114 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 ARSKQ6UWY0 536 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 ADGRE4PQ86SQ3 457 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 UBQLNLQ8IYU4 475 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 TLCD1Q96CP7 247 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 C1GALT1C1Q96EU7 318 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 KLHDC3Q9BQ90 382 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 BTBD2Q9BX70 525 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 PIGUQ9H490 435 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 ZNF337Q9Y3M9 751 aa23.8■■□□□ 1.4
VEGFA-207ENST00000413642 ALG1L2C9J202 215 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 TBXA2RP21731 343 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 UQCRC1P31930 480 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 RNF144AP50876 292 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-207ENST00000413642 DGKQP52824 942 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 CLDN15P56746 228 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 CDC73Q6P1J9 531 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 CAMKMTQ7Z624 323 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 NATD1Q8N6N6 113 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 OR56A1Q8NGH5 318 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 ACTRT3Q9BYD9 372 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 PTGES2Q9H7Z7 377 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 GIN1Q9NXP7 522 aa23.79■■□□□ 1.4
VEGFA-207ENST00000413642 ABCA12Q86UK0 2595 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 IGLV3-32A0A0A0MS00 114 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 NPIPA5A0A0B4J1W7 369 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 OR2M5A3KFT3 312 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 NPIPA7E9PJI5 369 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 ANKRD28O15084 1053 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 NDUFB5O43674 189 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 SNUPNO95149 360 aaKnown RBP23.78■■□□□ 1.4
VEGFA-207ENST00000413642 NPIPA8P0DM63 369 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 LBPP18428 481 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 CTSSP25774 331 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 SOAT1P35610 550 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 SUCLG1P53597 346 aaKnown RBP23.78■■□□□ 1.4
VEGFA-207ENST00000413642 RPS26P62854 115 aaKnown RBP23.78■■□□□ 1.4
VEGFA-207ENST00000413642 PHC1P78364 1004 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 DTNBP1Q96EV8 351 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 STACQ99469 402 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 NPAS1Q99742 590 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 SH3GL2Q99962 352 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 DPY30Q9C005 99 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 MEAF6Q9HAF1 191 aa23.78■■□□□ 1.4
VEGFA-207ENST00000413642 DUSP22Q9NRW4 184 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms