RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SMPDL3BQ92485 455 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 INTS12Q96CB8 462 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZNF764Q96H86 408 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 SH3YL1Q96HL8 342 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 LURAP1Q96LR2 239 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 MS4A4EQ96PG1 132 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 DUSP26Q9BV47 211 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 PTGES2Q9H7Z7 377 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ATAD3AQ9NVI7 634 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 FAM120CQ9NX05 1096 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 NOP53Q9NZM5 478 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 NTMQ9P121 344 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 VDAC3Q9Y277 283 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ACTL7BQ9Y614 415 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 NINQ8N4C6 2090 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 GTF3C1Q12789 2109 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZNF407Q9C0G0 2248 aa9.21□□□□□ -0.93
NCKIPSD-202ENST00000413374 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CD8B2A6NJW9 211 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 TTC36A6NLP5 189 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 EEF1E1-BLOC1S5C9J1V9 151 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 H3BML4 177 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 DVL2O14641 736 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 SEC14L5O43304 696 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 EEF1E1O43324 174 aaKnown RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 NDUFB5O43674 189 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ERLIN1O75477 346 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 OXSR1O95747 527 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 HPGDP15428 266 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 POU3F2P20265 443 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CTSSP25774 331 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 SSTR2P30874 369 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 SUCLG1P53597 346 aaKnown RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CLDN18P56856 261 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 RPS26P62854 115 aaKnown RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 HBA1P69905 142 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 POU6F2P78424 691 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 MAD2L1Q13257 205 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 MLC1Q15049 377 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 SLC25A35Q3KQZ1 300 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 POMZP3Q6PJE2 187 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CHMP1BQ7LBR1 199 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 OLIG3Q7RTU3 272 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 P4HA3Q7Z4N8 544 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ANKRD46Q86W74 232 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZZZ3Q8IYH5 903 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR5D16Q8NGK9 328 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR4A15Q8NGL6 344 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 FAM110BQ8TC76 370 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ADAMTS15Q8TE58 950 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 HOXB13Q92826 284 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 NPAS1Q99742 590 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 KLHDC3Q9BQ90 382 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF559Q9BR84 538 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 G6PC3Q9BUM1 346 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 DPY30Q9C005 99 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 BHLHE41Q9C0J9 482 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 WDR55Q9H6Y2 383 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CALHM2Q9HA72 323 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 TMBIM4Q9HC24 238 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 MARCOQ9UEW3 520 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 FAF1Q9UNN5 650 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 ABCG2Q9UNQ0 655 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 MRPS18CQ9Y3D5 142 aaKnown RBP9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 CACNA1DQ01668 2161 aa9.21□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR2M5A3KFT3 312 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MBD3L4A6NDZ8 208 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MBD3L3A6NE82 208 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MBD3L5A6NJ08 208 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 C9JVG2 144 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 SYT5O00445 386 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 SCDO00767 359 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 TGM6O95932 706 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 IFI6P09912 130 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 PEPDP12955 493 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 IGFBP2P18065 325 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 LBPP18428 481 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 ATP6V1C1P21283 382 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 TBXA2RP21731 343 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MATN1P21941 496 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 CHMP24386 653 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 CLDN15P56746 228 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 CLDN20P56880 219 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 CDC73Q6P1J9 531 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZCCHC12Q6PEW1 402 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 C6orf120Q7Z4R8 191 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 LUZP2Q86TE4 346 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 TMEM200AQ86VY9 491 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 GRAMD2AQ8IUY3 354 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 ACBD4Q8NC06 268 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MBD3L2Q8NHZ7 208 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 FIG4Q92562 907 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 C1GALT1C1Q96EU7 318 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 C14orf79Q96F83 325 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR7D2Q96RA2 312 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms