RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 AMER3Q8N944 861 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CAMKVQ8NCB2 501 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CLEC18CQ8NCF0 446 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 OR11G2Q8NGC1 345 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 RHOXF1Q8NHV9 184 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CANT1Q8WVQ1 401 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 THOC3Q96J01 351 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 AGAP4Q96P64 663 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CIB1Q99828 191 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 TRAF4Q9BUZ4 470 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SLC29A3Q9BZD2 475 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 LHPPQ9H008 270 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ATG10Q9H0Y0 220 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 TPK1Q9H3S4 243 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 RAD21L1Q9H4I0 556 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 WDR55Q9H6Y2 383 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 EML4Q9HC35 981 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ZBTB20Q9HC78 741 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MKKSQ9NPJ1 570 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 C14orf105Q9NVL8 296 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ARL15Q9NXU5 204 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SMPD3Q9NY59 655 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 USE1Q9NZ43 259 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ENPP5Q9UJA9 477 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 C3orf18Q9UK00 162 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SH2B3Q9UQQ2 575 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ACOT9Q9Y305 439 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MRPS2Q9Y399 296 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SNX13Q9Y5W8 968 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 HSPE1-MOB4S4R3N1 261 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ASH1LQ9NR48 2969 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 GTF3C1Q12789 2109 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MYO7BQ6PIF6 2116 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 UBR5O95071 2799 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SPTBN1Q01082 2364 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 KCNE1BA0A087WTH5 132 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NSG1A0A0A6YYJ2 146 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 FEZF1A0PJY2 475 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 FAM172BPA6NC97 362 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 IDSB3KWA1 339 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 H0YIG0 161 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 STX16-NPEPL1H3BU86 382 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 UBXN8O00124 270 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 PCDH17O14917 1159 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 UBDO15205 165 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SLC16A6O15403 523 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CFLARO15519 480 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 PHGDHO43175 533 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 LCMT2O60294 686 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NOL3O60936 208 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 BCAS1O75363 584 aaPredicted RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 AGFG2O95081 481 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 GABARAPO95166 117 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 WISP3O95389 354 aaPredicted RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NSA2O95478 260 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 TSPAN12O95859 305 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 GNAO1P09471 354 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SLC35E2BP0CK96 405 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 COX6A1P12074 109 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CDH1P12830 882 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CD1EP15812 388 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NPPBP16860 134 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF182P17025 639 aaPredicted RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 M6PRP20645 277 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SAT1P21673 171 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 MATN1P21941 496 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 GPX3P22352 226 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 FDXRP22570 491 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 PSMA4P25789 261 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 HTR1EP28566 365 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 IL12AP29459 219 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 UGT2B10P36537 528 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 EIF2B2P49770 351 aaKnown RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CCR8P51685 355 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NAGLUP54802 743 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CDH15P55291 814 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 AP1S2P56377 157 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CSNK2BP67870 215 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SRSF1Q07955 248 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 Q0VFX4 171 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 FADDQ13158 208 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ITGADQ13349 1161 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CTF1Q16619 201 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 HIST2H2ACQ16777 129 aaPredicted RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 UGT3A2Q3SY77 523 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ATAD3BQ5T9A4 648 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 FHL5Q5TD97 284 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ATG9BQ674R7 924 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CAPN13Q6MZZ7 669 aaPredicted RBP4.92□□□□□ -1.62
LINC00342-201ENST00000412393 IGFL2Q6UWQ7 119 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ISLR2Q6UXK2 745 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 PLEKHG7Q6ZR37 379 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 Q6ZS92 163 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SLC16A12Q6ZSM3 486 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 NDUFAF7Q7L592 441 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 STRA8Q7Z7C7 330 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 ASPGQ86U10 573 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 CUZD1Q86UP6 607 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 EPHX4Q8IUS5 362 aa4.92□□□□□ -1.62
LINC00342-201ENST00000412393 SLC22A9Q8IVM8 553 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms