RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 GDAP2Q9NXN4 497 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZNF586Q9NXT0 402 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 NKIRAS2Q9NYR9 191 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 LHX3Q9UBR4 397 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 DNAJB9Q9UBS3 223 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 NPC1L1Q9UHC9 1359 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 PURGQ9UJV8 347 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 IFT52Q9Y366 437 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 USP16Q9Y5T5 823 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 POMT1Q9Y6A1 747 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 LTBP4Q8N2S1 1624 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 LRIT2A6NDA9 550 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 SDR42E2A6NKP2 422 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 EFNA2O43921 213 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 CABYRO75952 493 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 AKR7A3O95154 331 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 KLF8O95600 359 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 IGFBP1P08833 259 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 HOXD10P28358 340 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 NPY2RP49146 381 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 STK19P49842 368 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 CACNG7P62955 275 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 NOP14P78316 857 aaKnown RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 CDKL1Q00532 357 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OC90Q02509 493 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 EIF2B1Q14232 305 aaKnown RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 RSPO1Q2MKA7 263 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 GPAT3Q53EU6 434 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 C5orf47Q569G3 176 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 CCDC158Q5M9N0 1113 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 LIPKQ5VXJ0 399 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 RFLNAQ6ZTI6 216 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 KRT74Q7RTS7 529 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 TUSC5Q8IXB3 177 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 SIDT2Q8NBJ9 832 aaKnown RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR2T33Q8NG76 320 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR51G1Q8NGK1 321 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR2L8Q8NGY9 312 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR4A16Q8NH70 328 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 UBALD1Q8TB05 177 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 GIMAP1Q8WWP7 306 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 FRZBQ92765 325 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 MCHR2Q969V1 340 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAB7BQ96AH8 199 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAB39BQ96DA2 213 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 GPR137Q96N19 417 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR2M2Q96R28 347 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 SPIN2AQ99865 258 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 SPIN2BQ9BPZ2 258 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 PELOQ9BRX2 385 aaKnown RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 ULBP2Q9BZM5 246 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 TMEM206Q9H813 350 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 TUFT1Q9NNX1 390 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 PAK1IP1Q9NWT1 392 aaPredicted RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 EHFQ9NZC4 300 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 ANKMY1Q9P2S6 941 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 TEKT2Q9UIF3 430 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 RIMS3Q9UJD0 308 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 FBXL5Q9UKA1 691 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 ERVW-1Q9UQF0 538 aa0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 PRRC2BQ5JSZ5 2229 aaKnown RBP0.5□□□□□ -2.33
RNU2-55P-201ENST00000411146 IGSF9BQ9UPX0 1349 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 SHROOM3Q8TF72 1996 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 IGHV7-81A0A0B4J1V7 117 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZNF705EA8MWA4 302 aaPredicted RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 GFYI3L273 518 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 IFIT3O14879 490 aaKnown RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 GAS8O95995 478 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 JCHAINP01591 159 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PCCBP05166 539 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 RHOXF2BP0C7M4 288 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 C8orf89P0DMQ9 161 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PNMTP11086 282 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 CCNA2P20248 432 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 STIP1P31948 543 aaKnown RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 CSNK1DP48730 415 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 EFNB2P52799 333 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 NLRP11P59045 1033 aaKnown RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 ACTA2P62736 377 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 ACTC1P68032 377 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PLOD1Q02809 727 aaPredicted RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 ST3GAL3Q11203 375 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 BNIP1Q12981 228 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PSG5Q15238 335 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 TWISTNBQ3B726 338 aaPredicted RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 LY6G6FQ5SQ64 297 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PRAMEF8Q5VWM4 474 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 KCTD11Q693B1 232 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 CD164L2Q6UWJ8 174 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 STAC2Q6ZMT1 411 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 GBP6Q6ZN66 633 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 FAM47EQ6ZV65 393 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 LCA5Q86VQ0 697 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 CHCHD4Q8N4Q1 142 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR9A4Q8NGU2 314 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 RNASE8Q8TDE3 154 aaKnown RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAB3IPQ96QF0 476 aaPredicted RBP0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 RASL11BQ9BPW5 248 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 SH2D2AQ9NP31 389 aa0.49□□□□□ -2.33
RNU2-55P-201ENST00000411146 PFDN4Q9NQP4 134 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms