RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ZG16BQ96DA0 208 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 TRPV5Q9NQA5 729 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 SERHLQ9NQF3 203 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 J3QLW9 94 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 BCL10O95999 233 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 DBIP07108 87 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 STSP08842 583 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 GNAO1P09471 354 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ZGLP1P0C6A0 271 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ZNF19P17023 458 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 DBPQ10586 325 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 GK3PQ14409 553 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 FCRL6Q6DN72 434 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ARL9Q6T311 187 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 OR6T1Q8NGN1 323 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 CNOT9Q92600 299 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 SAMD8Q96LT4 415 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 NFKBIL1Q9UBC1 381 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 GRHPRQ9UBQ7 328 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 HEMK1Q9Y5R4 338 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 CDH23Q9H251 3354 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 A0A1B0GTQ1 180 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 A0A1W2PPL8 197 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 IGHV3-9P01782 118 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SP9P0CG40 484 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SERPINB10P48595 397 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 GMFBP60983 142 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SQSTM1Q13501 440 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ZXDCQ2QGD7 858 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 DEFB109BQ30KR1 87 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 IQCCQ4KMZ1 466 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 NIPAL1Q6NVV3 410 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 DLEU7Q6UYE1 221 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ZNF550Q7Z398 422 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SATL1Q86VE3 508 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 CA13Q8N1Q1 262 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SVOPLQ8N434 492 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 NKD1Q969G9 470 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 MOAP1Q96BY2 351 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 MPP4Q96JB8 637 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 CCDC115Q96NT0 180 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 POLR2J2Q9GZM3 115 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 NUAK2Q9H093 628 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 NXF5Q9H1B4 397 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 FOLH1BQ9HBA9 442 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 PRDM7Q9NQW5 492 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ENPP4Q9Y6X5 453 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 LRRN3E7EW58 273 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 PRR23D1E9PI22 279 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 H7C1C5 153 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 FLRT2O43155 660 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SNX4O95219 450 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 MT-CO3P00414 261 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 PRR23D2P0DMB1 279 aaPredicted RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 RPS5P46782 204 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 CDH11P55287 796 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 LCN6P62502 163 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SLC3A1Q07837 685 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 OR7A5Q15622 319 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SHQ1Q6PI26 577 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SPRED1Q7Z699 444 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 OR52E2Q8NGJ4 325 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 C16orf52Q8NHV5 167 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 SNIP1Q8TAD8 396 aaKnown RBP10.61□□□□□ -0.71
SNX13-202ENST00000409604 FANK1Q8TC84 345 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 RNF121Q9H920 327 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ABCA4P78363 2273 aa10.61□□□□□ -0.71
SNX13-202ENST00000409604 ALDH3A2P51648 485 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 NPTX1Q15818 432 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 OR6N2Q8NGY6 317 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 STON2Q8WXE9 905 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 TAMM41Q96BW9 452 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 TRNT1Q96Q11 434 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 SLAMF7Q9NQ25 335 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 DCAF13Q9NV06 445 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 SPIN1Q9Y657 262 aaPredicted RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 TECTAO75443 2155 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 A0A0G2JPF8 293 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 VSTM2BA6NLU5 285 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 HNRNPCL3B7ZW38 293 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SHISA8B8ZZ34 492 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 HRKO00198 91 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 LILRB5O75023 590 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 HNRNPCL4P0DMR1 293 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 PGCP20142 388 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.71
SNX13-202ENST00000409604 TMEM176BQ3YBM2 270 aaPredicted RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 RPS19BP1Q86WX3 136 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 ZNF300Q96RE9 604 aaPredicted RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 WASH6PQ9NQA3 447 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 OR2A25A4D2G3 310 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 UPK1AO00322 258 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 OR2J2O76002 312 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 MFN2O95140 757 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 UBL4AP11441 157 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms