RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PPP3R1P63098 170 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 PLK5Q496M5 336 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 HS6ST3Q8IZP7 471 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.21■□□□□ 0.033e-11■■■■■ 30.8
COL4A3BP-204ENST00000405807 C1GALT1C1Q96EU7 318 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 OR4K3Q96R72 315 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC38A3Q99624 504 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 RERGLQ9H628 205 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 PCDHB7Q9Y5E2 793 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 SPIN1Q9Y657 262 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 HEPACAM2A8MVW5 462 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 ARHGEF33A8MVX0 844 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 AIPO00170 330 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 STK25O00506 426 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 FAAHO00519 579 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 LATS1O95835 1130 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 HLA-DQB1P01920 261 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 FURINP09958 794 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 MAN2A2P49641 1150 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 SMAD3P84022 425 aaKnown RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 RIPPLY1Q0D2K3 151 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 KCNA10Q16322 511 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 RNF212Q495C1 297 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 MED27Q6P2C8 311 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 TMEM88Q6PEY1 159 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 MCATQ8IVS2 390 aaKnown RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 Q8N402 240 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF248Q8NDW4 579 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 TEFMQ96QE5 360 aaKnown RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 OPN3Q9H1Y3 402 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 SEBOXQ9HB31 216 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 STOX2Q9P2F5 926 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 GSTK1Q9Y2Q3 226 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 FAM240BA0A1B0GVZ2 78 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 FAM170BA6NMN3 283 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 APEX1P27695 318 aaKnown RBP15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 SOAT1P35610 550 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 STK19P49842 368 aaPredicted RBP15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 RPS7P62081 194 aaKnown RBP15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 MC1RQ01726 317 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 KANSL1Q7Z3B3 1105 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 BCDIN3DQ7Z5W3 292 aaKnown RBP15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 FAM26EQ8N5C1 309 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 SFXN2Q96NB2 322 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 SYT17Q9BSW7 474 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 KATNB1Q9BVA0 655 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 GPR61Q9BZJ8 451 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 TVP23BQ9NYZ1 205 aa15.21■□□□□ 0.02
COL4A3BP-204ENST00000405807 A0A1W2PRB8 838 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLCO2B1O94956 709 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 RORAP35398 523 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLC11A1P49279 550 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PNLIPRP1P54315 467 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PDE7AQ13946 482 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 MICBQ29980 383 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZNF284Q2VY69 593 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 NHLRC3Q5JS37 347 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 METAP1DQ6UB28 335 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR52I1Q8NGK6 324 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR2T4Q8NH00 348 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PPIL1Q9Y3C6 166 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PRKAB1Q9Y478 270 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 C5orf58C9J3I9 102 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 M0R233 179 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 TXNL1O43396 289 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 TLX2O43763 284 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZNF821O75541 412 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 NR2F6P10588 404 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 CYBAP13498 195 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 LHCGRP22888 699 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ELAVL4P26378 380 aaKnown RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 SPINT3P49223 89 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PRAMEF13Q5VWM6 474 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 CEACAM20Q6UY09 585 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 SHFQ7M4L6 423 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 OTOP2Q7RTS6 562 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 TAS1R1Q7RTX1 841 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 COMMD6Q7Z4G1 85 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 WDR53Q7Z5U6 358 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 PDZD3Q86UT5 571 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 KLHDC8AQ8IYD2 350 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZNF511Q8NB15 262 aa15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 TMEM121BQ9BXQ6 578 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-204ENST00000405807 ORC5O43913 435 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MTX2O75431 263 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 AGR2O95994 175 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 GBAP04062 536 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 H1F0P07305 194 aaKnown RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 WNT4P56705 351 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MINDY4Q4G0A6 757 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 CRTC2Q53ET0 693 aaPredicted RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 KLHL22Q53GT1 634 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 C16orf78Q8WTQ4 265 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms