RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CMTM6Q9NX76 183 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CNIH4Q9P003 139 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 USP22Q9UPT9 525 aa11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KLF13Q9Y2Y9 288 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DSPPQ9NZW4 1301 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TP53I11O14683 189 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 STX11O75558 287 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 H6PDO95479 791 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 AGR2O95994 175 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 P04436 131 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 BCHEP06276 602 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NGFRP08138 427 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 LCN1P31025 176 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 EVI2BP34910 448 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MEOX1P50221 254 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RNF144AP50876 292 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PSMD4P55036 377 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CBX1P83916 185 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CHRNEQ04844 493 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CD226Q15762 336 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KLHL26Q53HC5 615 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RPS26P11Q5JNZ5 115 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TRPM8Q7Z2W7 1104 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 C16orf62Q7Z3J2 963 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 HMGN2P46Q86SG4 172 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC15A3Q8IY34 581 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZFP62Q8NB50 900 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TRNT1Q96Q11 434 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 G6PC3Q9BUM1 346 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OSBPL11Q9BXB4 747 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 EFCAB1Q9HAE3 211 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TUBA8Q9NY65 449 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 P2RX2Q9UBL9 471 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MRTO4Q9UKD2 239 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MKLN1Q9UL63 735 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PCDHGB3Q9Y5G1 929 aa11.35□□□□□ -0.59
HLA-DQB1-203ENST00000399082 EVPLLA8MZ36 301 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ALG1L2C9J202 215 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NME4O00746 187 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OIP5O43482 229 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SCO2O43819 266 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 BCAS1O75363 584 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 UGT2B17O75795 530 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GLSO94925 669 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 UBOX5O94941 541 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TBXA2RP21731 343 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RPS4Y1P22090 263 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CPOXP36551 454 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DCTP40126 519 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC7A2P52569 658 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SNTA1Q13424 505 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GPR68Q15743 365 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF141Q15928 474 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 INAQ16352 499 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FLYWCH1Q4VC44 716 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GPAT3Q53EU6 434 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GCNT6Q5T4J0 391 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ATAD3BQ5T9A4 648 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF324BQ6AW86 544 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 LRRC74BQ6ZQY2 392 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MARCH3Q86UD3 253 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF843Q8N446 348 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 WDSUB1Q8N9V3 476 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 OR10A6Q8NH74 314 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMCO6Q96DC7 493 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SNRNP40Q96DI7 357 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMEM41AQ96HV5 264 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF583Q96ND8 569 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 BARD1Q99728 777 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FAM173AQ9BQD7 235 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DOHHQ9BU89 302 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 THUMPD3Q9BV44 507 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 METTL7AQ9H8H3 244 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ABCD2Q9UBJ2 740 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANAPC2Q9UJX6 822 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ABCG2Q9UNQ0 655 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 LIPT1Q9Y234 373 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 WDR45Q9Y484 360 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 WIF1Q9Y5W5 379 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PCNX3Q9H6A9 2034 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SHANK1Q9Y566 2161 aa11.34□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CCT8L1PA6NM43 557 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SUV39H1O43463 412 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SLC28A2O43868 658 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HS6ST1O60243 411 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 RASAL1O95294 804 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms