RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CHRM4P08173 479 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 FAM87AP0C7U9 286 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 NPIPA8P0DM63 369 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 CYP4B1P13584 511 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 NCK1P16333 377 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 LCN1P31025 176 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 PCGF2P35227 344 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 DCTP40126 519 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 MVDP53602 400 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ATP12AP54707 1039 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 NCALDP61601 193 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 BNIP2Q12982 314 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 KCNAB2Q13303 367 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 TUBA3CQ13748 450 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 COL28A1Q2UY09 1125 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 GRAMD1BQ3KR37 738 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 LACTB2Q53H82 288 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF311Q5JNZ3 666 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 PRAMEF20Q5VT98 475 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 GLYATQ6IB77 296 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 SPINK14Q6IE38 97 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 HEPHL1Q6MZM0 1159 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 TUBA3EQ6PEY2 450 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ASB18Q6ZVZ8 466 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 EIF3MQ7L2H7 374 aaKnown RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 OLIG3Q7RTU3 272 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 YTHDF3Q7Z739 585 aaKnown RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 DHFR2Q86XF0 187 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 HPS6Q86YV9 775 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 TMCO5AQ8N6Q1 288 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 GATSQ8NAP1 163 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 OR52P1PQ8NH57 321 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 C9orf43Q8TAL5 461 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 PHOSPHO1Q8TCT1 267 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 LZICQ8WZA0 190 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 TTC9Q92623 222 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 SLC7A6OSQ96CW6 309 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ABHD17AQ96GS6 310 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 TPD52L3Q96J77 140 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 CLPTM1LQ96KA5 538 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF71Q9NQZ8 489 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 SACM1LQ9NTJ5 587 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 FBXO34Q9NWN3 711 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ADPRHL2Q9NX46 363 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 KLHL28Q9NXS3 571 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 ABCD2Q9UBJ2 740 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 MAGEL2Q9UJ55 1249 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 IFT52Q9Y366 437 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 PCDHGA9Q9Y5G4 932 aaKnown RBP8.21□□□□□ -1.1
BRCC3-206ENST00000399042 GMEB1Q9Y692 573 aa8.21□□□□□ -1.1
BRCC3-206ENST00000399042 FREM2Q5SZK8 3169 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TRAV17A0A0B4J275 112 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 KLRC4-KLRK1H3BQV0 150 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 M0QX08 132 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SUV39H1O43463 412 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 GMFGO60234 142 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TSPAN2O60636 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 DPM1O60762 260 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 NADKO95544 446 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 NUDT14O95848 222 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 IGKV1D-16P01601 117 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 BMP2P12643 396 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 HSD17B1P14061 328 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ETS2P15036 469 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TBXA2RP21731 343 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 HTR1EP28566 365 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 EVI2BP34910 448 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 MAP3K8P41279 467 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CCR4P51679 360 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRR20EP86478 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRR20CP86479 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRR20DP86480 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRR20BP86481 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRR20AP86496 221 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 RHDQ02161 417 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PLGLB1Q02325 96 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CEACAM7Q14002 265 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 VEZF1Q14119 521 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TOMM20Q15388 145 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ADRM1Q16186 407 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 NTRK2Q16620 822 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF791Q3KP31 576 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 LIN52Q52LA3 116 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF766Q5HY98 468 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PDZK1Q5T2W1 519 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF468Q5VIY5 522 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 C1orf146Q5VVC0 180 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRAMEF8Q5VWM4 474 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PRAMEF7Q5VXH5 474 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TYW3Q6IPR3 259 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SLC25A25Q6KCM7 469 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms