RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 CIDECQ96AQ7 238 aaPredicted RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 C7orf50Q9BRJ6 194 aaKnown RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 OR1A2Q9Y585 309 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 GABRPO00591 440 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 AOAHP28039 575 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 PTGER1P34995 402 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 ELAVL3Q14576 367 aaKnown RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 VRK3Q8IV63 474 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 GPALPP1Q8IXQ4 340 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 WDR48Q8TAF3 677 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 RNF31Q96EP0 1072 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 PDLIM5Q96HC4 596 aaKnown RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 CDCP1Q9H5V8 836 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 BIN3Q9NQY0 253 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF639Q9UID6 485 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 MAP1BP46821 2468 aaKnown RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 PEX11BO96011 259 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 S100A2P29034 98 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 VEGFBP49765 207 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 PAQR6Q6TCH4 344 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 CPOQ8IVL8 374 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 LILRA3Q8N6C8 439 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ASB11Q8WXH4 323 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 TCEAL3Q969E4 200 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 TRMT2BQ96GJ1 504 aaKnown RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 FAM46AQ96IP4 442 aaKnown RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 COMMD4Q9H0A8 199 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 PLCXD1Q9NUJ7 323 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 GREB1LQ9C091 1923 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 A0A0G2JMP0 313 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 TRBV4-1A0A0J9YWV2 114 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF860A6NHJ4 632 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 RNF144AP50876 292 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 EXOSC2Q13868 293 aaKnown RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 GID4Q8IVV7 300 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC44A3Q8N4M1 653 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 COX18Q8N8Q8 333 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 OR4M2Q8NGB6 313 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 GRHL3Q8TE85 626 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC25A46Q96AG3 418 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 RAD9AQ99638 391 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF350Q9GZX5 532 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ASF1BQ9NVP2 202 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SDHAF2Q9NX18 166 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SH2B3Q9UQQ2 575 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 F11P03951 625 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 RAB40BQ12829 278 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ZBTB37Q5TC79 503 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 TIGD3Q6B0B8 471 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 NXPE4Q6UWF7 544 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 OR51A7Q8NH64 312 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF689Q96CS4 500 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 AK6Q9Y3D8 172 aaKnown RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 ARID1AO14497 2285 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 hCG_1807616A0A1W2PRN6 198 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 HSD3B1P14060 373 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 HSD3B2P26439 372 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SDR16C5Q8N3Y7 309 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 KIAA1143Q96AT1 154 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 SFXN2Q96NB2 322 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
RPRD1A-202ENST00000399022 GTPBP1O00178 669 aaKnown RBP13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 GOSR2O14653 212 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 DSCR3O14972 297 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 CCR6P51684 374 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 ACVR1Q04771 509 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 DUSP6Q16828 381 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 HES5Q5TA89 166 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 TCTE3Q8IZS6 198 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 FCRL1Q96LA6 429 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 NLGN3Q9NZ94 848 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 TAPBPO15533 448 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 SIX6O95475 246 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 C1SP09871 688 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 HSD17B2P37059 387 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 PTH2RP49190 550 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 GPR176Q14439 515 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 PON3Q15166 354 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 BADQ92934 168 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 FATE1Q969F0 183 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 B3GNT4Q9C0J1 378 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 RCE1Q9Y256 329 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 C1orf196B1AJZ1 125 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 ITPKBP27987 946 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 HBA1P69905 142 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC5A12Q1EHB4 618 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 LIPIQ6XZB0 460 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC51BQ86UW2 128 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms