RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RPLP2P05387 115 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 RD3LP0DJH9 198 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 MUC1P15941 1255 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PTGER4P35408 488 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 GGT5P36269 586 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 WNT3AP56704 352 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ERVS71-1P61550 626 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 LSM11P83369 360 aaKnown RBP eCLIP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TNK2Q07912 1038 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ILKQ13418 452 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 EIF4EBP2Q13542 120 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 GDPD4Q6W3E5 623 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SPPL2CQ8IUH8 684 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 OR9I1Q8NGQ6 314 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CSGALNACT1Q8TDX6 532 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 NSMAFQ92636 917 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SLCO4A1Q96BD0 722 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 KCTD14Q9BQ13 255 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PCGF1Q9BSM1 259 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ALKBH7Q9BT30 221 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CXCL16Q9H2A7 254 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CATSPERZQ9NTU4 200 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SMOXQ9NWM0 555 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 MRPL22Q9NWU5 206 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 FLRT1Q9NZU1 646 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC2A6Q9UGQ3 507 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 HIF3AQ9Y2N7 669 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1W2PQH9 124 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TUBAL3A6NHL2 446 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SULT1C2O00338 296 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PAPSS2O95340 614 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 DCTDP32321 178 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TAPT1Q6NXT6 567 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 WDR88Q6ZMY6 472 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 DPY19L3Q6ZPD9 716 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 LARP4Q71RC2 724 aaKnown RBP eCLIP6.19□□□□□ -1.425e-8■□□□□ 9
TM9SF4-202ENST00000398022 ZNF438Q7Z4V0 828 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ABHD12BQ7Z5M8 362 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 IFNEQ86WN2 208 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 KLHDC8BQ8IXV7 354 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ARRDC1Q8N5I2 433 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 OR13F1Q8NGS4 319 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 UTP23Q9BRU9 249 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC25A51Q9H1U9 297 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ATXN3LQ9H3M9 355 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 AGPAT4Q9NRZ5 378 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 GSKIPQ9P0R6 139 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF451Q9Y4E5 1061 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SNX10Q9Y5X0 201 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 RALGAPA2Q2PPJ7 1873 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 HS3ST1O14792 307 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF780AO75290 641 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 VPS26AO75436 327 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 DDAH2O95865 285 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CYB5R3P00387 301 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TNFRSF1AP19438 455 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ITPKAP23677 461 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ATP5A1P25705 553 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ACADLP28330 430 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 C21orf33P30042 268 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SDHAP31040 664 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CEACAM6P40199 344 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 MAP2K4P45985 399 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 RPS9P46781 194 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TGM4P49221 684 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 KHKP50053 298 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF544Q6NX49 715 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PAQR9Q6ZVX9 377 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 ARHGAP12Q8IWW6 846 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PTGR2Q8N8N7 351 aaPredicted RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 CDYL2Q8N8U2 506 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 TWIST2Q8WVJ9 160 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 RIT1Q92963 219 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PCED1BQ96HM7 432 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SCLYQ96I15 445 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 KLHL15Q96M94 604 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 GGACTQ9BVM4 153 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 SHARPINQ9H0F6 387 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 AKTIPQ9H8T0 292 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 NANSQ9NR45 359 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 DUS2Q9NX74 493 aaKnown RBP6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 MIOSQ9NXC5 875 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 PTGDR2Q9Y5Y4 395 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1B0GTW7 788 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1B0GV72 72 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 H3BQ06 376 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 NME4O00746 187 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ARPC2O15144 300 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RNF13O43567 381 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 EPHX1P07099 455 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SRPRAP08240 638 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ELNP15502 786 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF250P15622 560 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CBLP22681 906 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CA5AP35218 305 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 TAF1AQ15573 450 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms