RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 HTR1EP28566 365 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 ATP12AP54707 1039 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 VEZF1Q14119 521 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 INTS11Q5TA45 600 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 SLC22A10Q63ZE4 541 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 ZNF227Q86WZ6 799 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 ZADH2Q8N4Q0 377 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 GOLM1Q8NBJ4 401 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 OR4C3Q8NH37 302 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 TIMMDC1Q9NPL8 285 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 UBQLN4Q9NRR5 601 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 CHCHD2Q9Y6H1 151 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 DSPPQ9NZW4 1301 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 K7EM74 188 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 OXSR1O95747 527 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 PDGFAP04085 211 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 CCL3P10147 92 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 HPGDP15428 266 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 ME2P23368 584 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 MSX2P35548 267 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 AP1ARQ63HQ0 302 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 IGFL3Q6UXB1 125 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 MDGA2Q7Z553 956 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 HMGN2P46Q86SG4 172 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 CATSPER1Q8NEC5 780 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 PAQR8Q8TEZ7 354 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 PMM1Q92871 262 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 ZG16BQ96DA0 208 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 BBC3Q96PG8 261 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 SECISBP2Q96T21 854 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 QRSL1Q9H0R6 528 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 METTL7AQ9H8H3 244 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 SH2D2AQ9NP31 389 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 EGFL7Q9UHF1 273 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 TP53TG5Q9Y2B4 290 aa21.65■■□□□ 1.06
TSPAN4-203ENST00000397397 NPIPB9F8W1W9 429 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 SCDO00767 359 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 SORBS2O94875 1100 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 TBXA2RP21731 343 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 EVI2BP34910 448 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 ASRGL1Q7L266 308 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 KRT73Q86Y46 540 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 HPS6Q86YV9 775 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 FBXW8Q8N3Y1 598 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 ZNF527Q8NB42 609 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 PSD4Q8NDX1 1056 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 MDS2Q8NDY4 140 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 GRHL3Q8TE85 626 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 FIG4Q92562 907 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 ZNF607Q96SK3 696 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 ADNPQ9H2P0 1102 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 CACYBPQ9HB71 228 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 CNIH4Q9P003 139 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 KCNE5Q9UJ90 142 aa21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 CNOT11Q9UKZ1 510 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-203ENST00000397397 ZFYVE26Q68DK2 2539 aa21.64■■□□□ 1.05
TSPAN4-203ENST00000397397 PRAMEF25A6NGN4 478 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CXCR6O00574 342 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 FADS1O60427 444 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 SLC25A12O75746 678 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 UGT2B17O75795 530 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PDE9AO76083 593 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 P04436 131 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 NGFRP08138 427 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ETS2P15036 469 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 NCK1P16333 377 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CLK3P49761 638 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 TNFSF10P50591 281 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PCBP3P57721 371 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF141Q15928 474 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 MAPK14Q16539 360 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PDZK1Q5T2W1 519 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PRAMEF20Q5VT98 475 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 BICRALQ6AI39 1079 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PATL1Q86TB9 770 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PEX5LQ8IYB4 626 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF614Q8N883 585 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 C9orf43Q8TAL5 461 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 C5orf34Q96MH7 638 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 TBL1XR1Q9BZK7 514 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 SACM1LQ9NTJ5 587 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 KLRF1Q9NZS2 232 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 SUCOQ9UBS9 1254 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 TUBD1Q9UJT1 453 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ABCG2Q9UNQ0 655 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CSAG2Q9Y5P2 127 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 GPC6Q9Y625 555 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 LOC400499M0QZD8 3231 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 EML6Q6ZMW3 1958 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CENPVL1A0A0U1RR11 272 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ERICH4A6NGS2 130 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 SCO2O43819 266 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 GMNNO75496 209 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 GCM2O75603 506 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CD46P15529 392 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 GGT1P19440 569 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CASP3P42574 277 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CD97P48960 835 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 RNF144AP50876 292 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 BNIP2Q12982 314 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms