RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MLC1Q15049 377 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 DECR1Q16698 335 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ZNF630Q2M218 657 aaPredicted RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 VPS26BQ4G0F5 336 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 DESI1Q6ICB0 168 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ZNF585AQ6P3V2 769 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SNX32Q86XE0 403 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 RIMKLAQ8IXN7 391 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 POU5F2Q8N7G0 328 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ASB5Q8WWX0 329 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 RND1Q92730 232 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SDCCAG3Q96C92 435 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 SLC6A15Q9H2J7 730 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 RUBCNLQ9H714 662 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SDR39U1Q9NRG7 319 aaPredicted RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 NTMQ9P121 344 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SPRR3Q9UBC9 169 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 CBLCQ9ULV8 474 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 MAPRE3Q9UPY8 281 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 CENPEQ02224 2701 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 CBR3O75828 277 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 PRPS1L1P21108 318 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ENDOUP21128 410 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 PTGER4P35408 488 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 CLDN8P56748 225 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ACTR3P61158 418 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SLC25A3Q00325 362 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 GAB1Q13480 694 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 TOMM20Q15388 145 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SPATS1Q496A3 300 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 MIER2Q8N344 545 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 PCYOX1LQ8NBM8 494 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 NUP43Q8NFH3 380 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 OR4N2Q8NGD1 307 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 CA5BP1Q8WTZ4 195 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 JADE3Q92613 823 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 ROPN1LQ96C74 230 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 GALNT9Q9HCQ5 603 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 NUP214P35658 2090 aaPredicted RBP13.28□□□□□ -0.28
SEC13-208ENST00000397109 PKDREJQ9NTG1 2253 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 A0A1W2PRB8 838 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 FAM47E-STBD1D6RA91 191 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 EMC8O43402 210 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 FKBP6O75344 327 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 NPPAP01160 153 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 CHRNB4P30926 498 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 GABRA3P34903 492 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 GCKP35557 465 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 PRKAG1P54619 331 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 PRR5P85299 388 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 PMPCAQ10713 525 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 SF3B4Q15427 424 aaKnown RBP eCLIP13.28□□□□□ -0.286e-8■■■■□ 20.7
SEC13-208ENST00000397109 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
SEC13-208ENST00000397109 CPTPQ5TA50 214 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ZNF787Q6DD87 383 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 AAGABQ6PD74 315 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ZCCHC12Q6PEW1 402 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 CAMKMTQ7Z624 323 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 PLCZ1Q86YW0 608 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 PM20D2Q8IYS1 436 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 DEFB107AQ8IZN7 70 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 CDRT4Q8N9R6 151 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 RNF138Q8WVD3 245 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 HOXB13Q92826 284 aaPredicted RBP13.28□□□□□ -0.28
SEC13-208ENST00000397109 STMN2Q93045 179 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 EFHD2Q96C19 240 aaPredicted RBP13.28□□□□□ -0.28
SEC13-208ENST00000397109 COQ8BQ96D53 544 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ALKBH4Q9NXW9 302 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ZIM2Q9NZV7 527 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 TNFRSF10DQ9UBN6 386 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 SLC7A8Q9UHI5 535 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 ABCG2Q9UNQ0 655 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 WIF1Q9Y5W5 379 aa13.28□□□□□ -0.28
SEC13-208ENST00000397109 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 AHRRA9YTQ3 701 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 AIM2O14862 343 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 KCNH1O95259 989 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 IL33O95760 270 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 CYP4B1P13584 511 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.29
SEC13-208ENST00000397109 NUDT2P50583 147 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 NUP107P57740 925 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 MMEL1Q495T6 779 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 AGKQ53H12 422 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 NHSL2Q5HYW2 709 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 C1orf185Q5T7R7 199 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 MARVELD2Q8N4S9 558 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 WDSUB1Q8N9V3 476 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.29
SEC13-208ENST00000397109 FBXO27Q8NI29 283 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms