RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SLC9A3R1O14745 358 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 SERPINI2O75830 405 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 HTR1FP30939 366 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MC3RP41968 323 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PER3P56645 1201 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 OR52N1Q8NH53 320 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 TMEM255BQ8WV15 326 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 ZFPM2Q8WW38 1151 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 HINT3Q9NQE9 182 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 CALML5Q9NZT1 146 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 GPR55Q9Y2T6 319 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 SURF4O15260 269 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 STX11O75558 287 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MT-ND5P03915 603 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PTGS2P35354 604 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 STXBP1P61764 594 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 SNTA1Q13424 505 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 FCRLBQ6BAA4 426 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LSRQ86X29 649 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MRPL15Q9P015 296 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 KCNN3Q9UGI6 736 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 SLC7A7Q9UM01 511 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PPIEQ9UNP9 301 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 B8ZZF3 427 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 NRG2O14511 850 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 TSPAN4O14817 238 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PCDH8O95206 1070 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LAG3P18627 525 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 AHCYP23526 432 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 NUDT1P36639 197 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MTNR1BP49286 362 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 CCR6P51684 374 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 HSF2Q03933 536 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PYHIN1Q6K0P9 492 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 SFXN4Q6P4A7 337 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LRRC56Q8IYG6 542 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 SIRT6Q8N6T7 355 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 ZNF614Q8N883 585 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 SPERTQ8NA61 448 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 POGLUT1Q8NBL1 392 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LMLNQ96KR4 655 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 OR7D2Q96RA2 312 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 SAGE1Q9NXZ1 904 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 A0A1W2PRG6 482 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LCMT2O60294 686 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 TCRBP04435 133 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 H2AFB2P0C5Z0 115 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 ATF4P18848 351 aaPredicted RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 RBMS1P29558 406 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 SLC6A1P30531 599 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 PRPF38BQ5VTL8 546 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 CD200R1LQ6Q8B3 271 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 TEX261Q6UWH6 196 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 DPH1Q9BZG8 443 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 MRPS18AQ9NVS2 196 aaKnown RBP13.78□□□□□ -0.2
CCNF-202ENST00000397066 U3KQ87 197 aa13.78□□□□□ -0.2
CCNF-202ENST00000397066 FZD7O75084 574 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 TCEA2Q15560 299 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 GPR68Q15743 365 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 CHMP1BQ7LBR1 199 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 ZNF547Q8IVP9 402 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 GID4Q8IVV7 300 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 OR9A2Q8NGT5 310 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 CEP76Q8TAP6 659 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 FANK1Q8TC84 345 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 NUBP2Q9Y5Y2 271 aa13.77□□□□□ -0.2
CCNF-202ENST00000397066 ADH1AP07327 375 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 PEPDP12955 493 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 ZNF782Q6ZMW2 699 aaPredicted RBP13.77□□□□□ -0.21
CCNF-202ENST00000397066 TMEM91Q6ZNR0 172 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 LRRTM4Q86VH4 590 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 RHBGQ9H310 441 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 UBQLN2Q9UHD9 624 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 EMC8O43402 210 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 OR5F1O95221 314 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 MT-ND4P03905 459 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 PYCR1P32322 319 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 VSX2P58304 361 aaPredicted RBP13.77□□□□□ -0.21
CCNF-202ENST00000397066 TMEM99Q8N816 258 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 NR4A3Q92570 626 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 CD180Q99467 661 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 FUZQ9BT04 418 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.21
CCNF-202ENST00000397066 CHST2Q9Y4C5 530 aa13.77□□□□□ -0.21
CCNF-202ENST00000397066 NUMA1Q14980 2115 aa13.76□□□□□ -0.21
CCNF-202ENST00000397066 SCAMP1O15126 338 aa13.76□□□□□ -0.21
CCNF-202ENST00000397066 ACADLP28330 430 aa13.76□□□□□ -0.21
CCNF-202ENST00000397066 CCR2P41597 374 aa13.76□□□□□ -0.21
CCNF-202ENST00000397066 AP2S1P53680 142 aaPredicted RBP13.76□□□□□ -0.21
CCNF-202ENST00000397066 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
CCNF-202ENST00000397066 ARHGEF6Q15052 776 aa13.76□□□□□ -0.21
CCNF-202ENST00000397066 SIAH3Q8IW03 269 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms