RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MED13LQ71F56 2210 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 OR2M5A3KFT3 312 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 HCRTR2O43614 444 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 TYROBPO43914 113 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.24
FXN-203ENST00000396366 TNFSF13O75888 250 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 LAMP1P11279 417 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 PEPDP12955 493 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 ETV4P43268 484 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 CLK3P49761 638 aaKnown RBP16.52■□□□□ 0.24
FXN-203ENST00000396366 ART1P52961 327 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 PSMD4P55036 377 aaKnown RBP16.52■□□□□ 0.24
FXN-203ENST00000396366 CLDN20P56880 219 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 PRR5P85299 388 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 BCL2A1Q16548 175 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 C6orf136Q5SQH8 315 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 WDR93Q6P2C0 686 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 EMBQ6PCB8 327 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 SPNS3Q6ZMD2 512 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 CDC20BQ86Y33 519 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 KRTCAP2Q8N6L1 136 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 CDRT4Q8N9R6 151 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 CEP70Q8NHQ1 597 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 FIG4Q92562 907 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 FAM120BQ96EK7 910 aaKnown RBP16.52■□□□□ 0.24
FXN-203ENST00000396366 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 NPAS1Q99742 590 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 SFXN3Q9BWM7 321 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 PTGES2Q9H7Z7 377 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.24
FXN-203ENST00000396366 GALNT8Q9NY28 637 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 ATP6V1HQ9UI12 483 aa16.52■□□□□ 0.24
FXN-203ENST00000396366 WDR91A4D1P6 747 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 H3BML4 177 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 SCAMP2O15127 329 aaKnown RBP16.51■□□□□ 0.23
FXN-203ENST00000396366 SEC14L5O43304 696 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 EMC8O43402 210 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 LYPLA1O75608 230 aaPredicted RBP16.51■□□□□ 0.23
FXN-203ENST00000396366 KCNK2O95069 426 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 PEX19P40855 299 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 ASMTP46597 345 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 C17orf67Q0P5P2 114 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 DAZAP2Q15038 168 aaPredicted RBP16.51■□□□□ 0.23
FXN-203ENST00000396366 CCNJQ5T5M9 372 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 IL23RQ5VWK5 629 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 MFSD12Q6NUT3 480 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 KIF18BQ86Y91 864 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 GATSQ8NAP1 163 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 FAM110BQ8TC76 370 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 MTERF3Q96E29 417 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 DTNBP1Q96EV8 351 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 ZNF845Q96IR2 970 aaPredicted RBP16.51■□□□□ 0.23
FXN-203ENST00000396366 PPP3R2Q96LZ3 170 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 ZFP3Q96NJ6 502 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 MS4A4EQ96PG1 132 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 KLHDC3Q9BQ90 382 aa16.51■□□□□ 0.23
FXN-203ENST00000396366 CCM2LQ9NUG4 571 aaPredicted RBP16.51■□□□□ 0.23
FXN-203ENST00000396366 NUP214P35658 2090 aaPredicted RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 IGLV3-32A0A0A0MS00 114 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 A0A1W2PNV4 684 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 SLC22A20A6NK97 555 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 TTC36A6NLP5 189 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 ITM2AO43736 263 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 OXSR1O95747 527 aaPredicted RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 EPXP11678 715 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 GANABQ14697 944 aaKnown RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 VPS26BQ4G0F5 336 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 EXOSC6Q5RKV6 272 aaKnown RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 CHMP1BQ7LBR1 199 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 P4HA3Q7Z4N8 544 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 R3HCC1LQ7Z5L2 792 aaKnown RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 MEIOBQ8N635 442 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 SMPDL3BQ92485 455 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 STARD4Q96DR4 205 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 TMEM109Q9BVC6 243 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 VDAC3Q9Y277 283 aa16.5■□□□□ 0.23
FXN-203ENST00000396366 PRRC2AP48634 2157 aaKnown RBP16.5■□□□□ 0.23
FXN-203ENST00000396366 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 A8MXE2 369 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 ALG1L2C9J202 215 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 OPN1LWP04000 364 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 HMGN2P05204 90 aaKnown RBP16.49■□□□□ 0.23
FXN-203ENST00000396366 ALOX5P09917 674 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 TBXA2RP21731 343 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 MAPK1P28482 360 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 HPCAL1P37235 193 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 CPA2P48052 419 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 RNF144AP50876 292 aaPredicted RBP16.49■□□□□ 0.23
FXN-203ENST00000396366 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 TMEM44Q2T9K0 475 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 ATP6AP1LQ52LC2 224 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 VWA1Q6PCB0 445 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 LRIG3Q6UXM1 1119 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 NUDCD3Q8IVD9 361 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 CNEP1R1Q8N9A8 125 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 FNDC5Q8NAU1 212 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 JADE3Q92613 823 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 CDS1Q92903 461 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms