RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 KRT34O76011 436 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 GDF1P27539 372 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 TRPC1P48995 793 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 STX5Q13190 355 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 PAGE3Q5JUK9 113 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 C6orf10Q5SRN2 563 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 DCST2Q5T1A1 773 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 TRIML2Q8N7C3 387 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 PNPT1Q8TCS8 783 aaKnown RBP15.1■□□□□ 0.01
CXCL1-201ENST00000395761 ZFP90Q8TF47 636 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 XAGE5Q8WWM1 108 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 G6PC3Q9BUM1 346 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
CXCL1-201ENST00000395761 UBQLN3Q9H347 655 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 SLAMF8Q9P0V8 285 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 B4GALT7Q9UBV7 327 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 LEF1Q9UJU2 399 aaPredicted RBP15.1■□□□□ 0.01
CXCL1-201ENST00000395761 ABCG2Q9UNQ0 655 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 PCDHGB3Q9Y5G1 929 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 ESPL1Q14674 2120 aa15.1■□□□□ 0.01
CXCL1-201ENST00000395761 NPIPA5A0A0B4J1W7 369 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 DUXAA6NLW8 204 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 NPIPA7E9PJI5 369 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SLC19A2O60779 497 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 TRAPPC6AO75865 159 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SOX30O94993 753 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 IGHG3P01860 377 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 ZCCHC18P0CG32 403 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 NPIPA8P0DM63 369 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 TBXA2RP21731 343 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 COX20Q5RI15 118 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 TRILQ7L0X0 811 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SNX32Q86XE0 403 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 PLCZ1Q86YW0 608 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SPPL2CQ8IUH8 684 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 DPP10Q8N608 796 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 DUSP19Q8WTR2 217 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SDF2Q99470 211 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 SLC6A15Q9H2J7 730 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 ARL8BQ9NVJ2 186 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 TNFRSF10DQ9UBN6 386 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 TAGLN3Q9UI15 199 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 FBXL2Q9UKC9 423 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 ZNF835Q9Y2P0 537 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 PCDHB14Q9Y5E9 798 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 NCKAP5O14513 1909 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 POLEQ07864 2286 aa15.09■□□□□ 0.01
CXCL1-201ENST00000395761 ZGRF1Q86YA3 2104 aa15.08■□□□□ 0.01
CXCL1-201ENST00000395761 PRAMEF27A3QJZ7 478 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 HMGN4O00479 90 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 FBP2O00757 339 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 FCMRO60667 390 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 SEMA7AO75326 666 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 ANP32DO95626 131 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 OXSR1O95747 527 aaPredicted RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 HPNP05981 417 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 STSP08842 583 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 HOXB9P17482 250 aaPredicted RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 ELAVL4P26378 380 aaKnown RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 CLK3P49761 638 aaKnown RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 KHKP50053 298 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 RNF144AP50876 292 aaPredicted RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 MVDP53602 400 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 RBPJQ06330 500 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 C3AR1Q16581 482 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 EIPR1Q53HC9 387 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.08■□□□□ 0
CXCL1-201ENST00000395761 C1QL3Q5VWW1 255 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 HEPHL1Q6MZM0 1159 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 MSRB3Q8IXL7 192 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 CHDHQ8NE62 594 aaPredicted RBP15.08■□□□□ 0
CXCL1-201ENST00000395761 NSL1Q96IY1 281 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 TBL1XR1Q9BZK7 514 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 DSN1Q9H410 356 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 LDAHQ9H6V9 325 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 TPT1P8Q9HAU6 139 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 ACKR4Q9NPB9 350 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 UBQLN4Q9NRR5 601 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 QPCTLQ9NXS2 382 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 SLC25A37Q9NYZ2 338 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 PPP4R1LQ9P1A2 415 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 SH3BGRL2Q9UJC5 107 aa15.08■□□□□ 0
CXCL1-201ENST00000395761 A0A096LPI6 279 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 TRGV5A0A0B4J1U4 118 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 A0A1B0GVC2 190 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 CLEC18AA5D8T8 446 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 ALG1L2C9J202 215 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 CBR3O75828 277 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 ZIC2O95409 532 aaPredicted RBP15.07■□□□□ 0
CXCL1-201ENST00000395761 KRT75O95678 551 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 ANGPTL1O95841 491 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 NPPAP01160 153 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 NGFRP08138 427 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 T-ENOLP0DO92 83 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 ABOP16442 354 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 ATP6V1C1P21283 382 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 LCN1P31025 176 aa15.07■□□□□ 0
CXCL1-201ENST00000395761 PTGS2P35354 604 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms