RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CLEC12BQ2HXU8 276 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 TMEM44Q2T9K0 475 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 CTU2Q2VPK5 515 aaKnown RBP18.91■□□□□ 0.62
TRAF4-203ENST00000394925 ALKBH2Q6NS38 261 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 AKAP1Q92667 903 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAF4-203ENST00000394925 ZNF382Q96SR6 550 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 TMEM204Q9BSN7 226 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 GRPEL1Q9HAV7 217 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 STOML1Q9UBI4 398 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 MRTO4Q9UKD2 239 aaKnown RBP18.91■□□□□ 0.62
TRAF4-203ENST00000394925 POC1B-GALNT4F8VUJ3 575 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 UPK1AO00322 258 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 SS18L1O75177 396 aaPredicted RBP18.9■□□□□ 0.62
TRAF4-203ENST00000394925 SOX30O94993 753 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 UTS2O95399 124 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 ANGPTL1O95841 491 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 OPN1LWP04000 364 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 DDCP20711 480 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 IL11P20809 199 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 RPS4XP62701 263 aaKnown RBP18.9■□□□□ 0.62
TRAF4-203ENST00000394925 DMTNQ08495 405 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 VEZF1Q14119 521 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 ZNHIT3Q15649 155 aaPredicted RBP18.9■□□□□ 0.62
TRAF4-203ENST00000394925 ZNF678Q5SXM1 525 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 GALNT18Q6P9A2 607 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 APOOLQ6UXV4 268 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 BEND4Q6ZU67 534 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 OR10D3Q8NH80 312 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 C11orf24Q96F05 449 aaPredicted RBP18.9■□□□□ 0.62
TRAF4-203ENST00000394925 FUT8Q9BYC5 575 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 SHCBP1LQ9BZQ2 653 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 FANCFQ9NPI8 374 aa18.9■□□□□ 0.62
TRAF4-203ENST00000394925 DDX18Q9NVP1 670 aaKnown RBP18.9■□□□□ 0.62
TRAF4-203ENST00000394925 IGLV3-32A0A0A0MS00 114 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 PSMD4P55036 377 aaKnown RBP18.89■□□□□ 0.61
TRAF4-203ENST00000394925 WDR75Q8IWA0 830 aaKnown RBP18.89■□□□□ 0.61
TRAF4-203ENST00000394925 RAB3IL1Q8TBN0 382 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 TMEM237Q96Q45 408 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 CDC42EP4Q9H3Q1 356 aaKnown RBP18.89■□□□□ 0.61
TRAF4-203ENST00000394925 GLIPR2Q9H4G4 154 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 MIEF1Q9NQG6 463 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 MCTS1Q9ULC4 181 aaKnown RBP18.89■□□□□ 0.61
TRAF4-203ENST00000394925 TIMM22Q9Y584 194 aa18.89■□□□□ 0.61
TRAF4-203ENST00000394925 GXYLT2A0PJZ3 443 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 CXCL13O43927 109 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 SLITRK5O94991 958 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 PSMG1O95456 288 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 SYNGR4O95473 234 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 TAC1P20366 129 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 CASQ1P31415 396 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 GABRA3P34903 492 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 GSTM5P46439 218 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 PRR5P85299 388 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 ZNF763Q0D2J5 394 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 GRAMD1BQ3KR37 738 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 SPDYAQ5MJ70 313 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 HEPHL1Q6MZM0 1159 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 STK32CQ86UX6 486 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 OR2L13Q8N349 312 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 DCAKDQ8WVC6 231 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 SLC9A6Q92581 669 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 ELP4Q96EB1 424 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 KCNA7Q96RP8 456 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 NPAS1Q99742 590 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 LMF2Q9BU23 707 aaKnown RBP18.88■□□□□ 0.61
TRAF4-203ENST00000394925 C12orf49Q9H741 205 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 PAQR5Q9NXK6 330 aaPredicted RBP18.88■□□□□ 0.61
TRAF4-203ENST00000394925 GRID1Q9ULK0 1009 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 GPR52Q9Y2T5 361 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 CR1P17927 2039 aa18.88■□□□□ 0.61
TRAF4-203ENST00000394925 DLX3O60479 287 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 IGKV1D-16P01601 117 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 ZNF17P17021 662 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 NTSP30990 170 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 HMBOX1Q6NT76 420 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 C8orf74Q6P047 294 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 GALNT10Q86SR1 603 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 TRMT61AQ96FX7 289 aaKnown RBP18.87■□□□□ 0.61
TRAF4-203ENST00000394925 ADGRG7Q96K78 797 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 AMDHD1Q96NU7 426 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 TACO1Q9BSH4 297 aaKnown RBP18.87■□□□□ 0.61
TRAF4-203ENST00000394925 REG4Q9BYZ8 158 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 C3orf14Q9HBI5 128 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 GLRX2Q9NS18 164 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 TMEM216Q9P0N5 145 aa18.87■□□□□ 0.61
TRAF4-203ENST00000394925 RNF212BA8MTL3 300 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 TNFSF11O14788 317 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 KCNH1O95259 989 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 TP53P04637 393 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-203ENST00000394925 PSMB1P20618 241 aaKnown RBP18.86■□□□□ 0.61
TRAF4-203ENST00000394925 IMPDH1P20839 514 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 ZNF844Q08AG5 666 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 FAM71E1Q6IPT2 247 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 MFSD12Q6NUT3 480 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 RELL1Q8IUW5 271 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 CEP112Q8N8E3 955 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
TRAF4-203ENST00000394925 LILRB1Q8NHL6 650 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-203ENST00000394925 NANOS1Q8WY41 292 aaKnown RBP18.86■□□□□ 0.61
TRAF4-203ENST00000394925 PIK3R3Q92569 461 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms