RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TMEM107Q6UX40 140 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MS4A15Q8N5U1 240 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ZFP41Q8N8Y5 198 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 LMNTD1Q8N9Z9 388 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 TEX19Q8NA77 164 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 OR4Q3Q8NH05 313 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 UCN3Q969E3 161 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 TCEAL4Q96EI5 215 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 AHCYL2Q96HN2 611 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 FCRL4Q96PJ5 515 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MENTQ9BUN1 341 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ALG8Q9BVK2 526 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SARGQ9BW04 601 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ABCG5Q9H222 651 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 HCFC1R1Q9NWW0 138 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 FBXL21Q9UKT6 434 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 LOC102723532A0A0G2JNH3 316 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 TEX51A0A1B0GUA7 166 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SMIM30A4D0T7 59 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 UNC119BA6NIH7 251 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 THBS1P07996 1170 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 F3P13726 295 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 AHCYP23526 432 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ATP5A1P25705 553 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SOX18P35713 384 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 AP2S1P53680 142 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GPLD1P80108 840 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 CDK3Q00526 305 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 IKZF1Q13422 519 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GALEQ14376 348 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GAS6Q14393 721 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GPR176Q14439 515 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 KRT33BQ14525 404 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 COL28A1Q2UY09 1125 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 PIP5KL1Q5T9C9 394 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ANKRD54Q6NXT1 300 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ABHD17CQ6PCB6 329 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SLC39A5Q6ZMH5 540 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SHFQ7M4L6 423 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 NRROSQ86YC3 692 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 NRMQ8IXM6 262 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ACOT4Q8N9L9 421 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 SLC2A12Q8TD20 617 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GANCQ8TET4 914 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MYLIPQ8WY64 445 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 PMM1Q92871 262 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 PHF21AQ96BD5 680 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MS4A6EQ96DS6 147 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MRPL48Q96GC5 212 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 RADILQ96JH8 1075 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 MS4A4EQ96PG1 132 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 GFM1Q96RP9 751 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 CD180Q99467 661 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 TIMM29Q9BSF4 260 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 YIPF4Q9BSR8 244 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 PRDM9Q9NQV7 894 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 CTPS2Q9NRF8 586 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 AKAP7Q9P0M2 348 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 ZNF443Q9Y2A4 671 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 NPFFR2Q9Y5X5 522 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 STON1Q9Y6Q2 735 aa9.39□□□□□ -0.91
UBE2D3-208ENST00000394803 A0A1W2PQ72 361 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ANKRD61A6NGH8 418 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 C12orf71A8MTZ7 269 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 J3QRE1 110 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 PLPP2O43688 288 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 PLOD3O60568 738 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 MOSPD3O75425 235 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CH25HO95992 272 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 LALBAP00709 142 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 PSMB5P28074 263 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CMPK1P30085 196 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CLCNKAP51800 687 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 MLLT1Q03111 559 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 NTRK2Q16620 822 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 PLA1AQ53H76 456 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 HEPHL1Q6MZM0 1159 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 NIPAL3Q6P499 406 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 GDF7Q7Z4P5 450 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CPOQ8IVL8 374 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ELMOD2Q8IZ81 293 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 SLC44A3Q8N4M1 653 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 HDDC3Q8N4P3 179 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ZNF366Q8N895 744 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 TP53I13Q8NBR0 393 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 OR5W2Q8NH69 310 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 FANK1Q8TC84 345 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ZNF431Q8TF32 576 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ELP4Q96EB1 424 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 IMP3Q9NV31 184 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 C14orf105Q9NVL8 296 aa9.38□□□□□ -0.91
UBE2D3-208ENST00000394803 ABRACLQ9P1F3 81 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms