RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PINK1Q9BXM7 581 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 IDH3BO43837 385 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF888P0CJ79 500 aaPredicted RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 NR2F6P10588 404 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 ACADMP11310 421 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 DDX5P17844 614 aaKnown RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 TBXA2RP21731 343 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 AHRP35869 848 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC1A3P43003 542 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 BNC1Q01954 994 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 Q5BKY6 102 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SMARCD3Q6STE5 483 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 IL20RBQ6UXL0 311 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 WDR88Q6ZMY6 472 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 GDPGP1Q6ZNW5 385 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 QSOX2Q6ZRP7 698 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 FAM92BQ6ZTR7 304 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 C16orf62Q7Z3J2 963 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 GDF7Q7Z4P5 450 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 NR2C2APQ86WQ0 139 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 RAB43Q86YS6 212 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 OR2L5Q8NG80 312 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 OR2L8Q8NGY9 312 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SPRYD4Q8WW59 207 aaPredicted RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 OR1E3Q8WZA6 343 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 FAM131CQ96AQ9 280 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 EFHD2Q96C19 240 aaPredicted RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SAMD8Q96LT4 415 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 TBC1D29Q9UFV1 150 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 PCDHGB2Q9Y5G2 931 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 A0A0G2JPF8 293 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 HNRNPCL3B7ZW38 293 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 CASKO14936 926 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 IL1AP01583 271 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 CCNYL3P0C7X3 344 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 HNRNPCL4P0DMR1 293 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 RGS8P57771 180 aaPredicted RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 TSPAN31Q12999 210 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 MAPK14Q16539 360 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 FAM27D1Q5T7N8 215 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 PLEKHM3Q6ZWE6 761 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 PRSS41Q7RTY9 318 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 KLBQ86Z14 1044 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 UBASH3BQ8TF42 649 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 MCHR1Q99705 422 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 ARHGDIGQ99819 225 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 HINT3Q9NQE9 182 aaKnown RBP12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC7A7Q9UM01 511 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 CLCA2Q9UQC9 943 aa12.58□□□□□ -0.4
GTF2F1-201ENST00000394456 PRR19A6NJB7 356 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 B4DXG7 233 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 POLR1CO15160 346 aaPredicted RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 P2RX6O15547 441 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 EMC8O43402 210 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 ZGLP1P0C6A0 271 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 NDUFV2P19404 249 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC9A3P48764 834 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 CD83Q01151 205 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TPBGQ13641 420 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 FRRS1Q6ZNA5 592 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 CPOQ8IVL8 374 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 GNPDA2Q8TDQ7 276 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 ARHGAP9Q9BRR9 750 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 RMI1Q9H9A7 625 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 MRPS2Q9Y399 296 aaKnown RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 CLCA3PQ9Y6N3 262 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 KDM4EB2RXH2 506 aaPredicted RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 SURF4O15260 269 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 RAB40BQ12829 278 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TRAM2Q15035 370 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 GPR68Q15743 365 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TRMT12Q53H54 448 aaKnown RBP12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 PDZK1Q5T2W1 519 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 AADACL4Q5VUY2 407 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 RNLSQ5VYX0 342 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF544Q6NX49 715 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 NATD1Q8N6N6 113 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 OR51G2Q8NGK0 314 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 UFD1Q92890 307 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 OR2M4Q96R27 311 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 TTTY10Q9BZA0 68 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 DPH1Q9BZG8 443 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
GTF2F1-201ENST00000394456 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms