RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NODALQ96S42 347 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SPATA5L1Q9BVQ7 753 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 PRORSD1PA6NEY8 169 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 PRAMEF25A6NGN4 478 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 PGM3O95394 542 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 SEMG1P04279 462 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 PABPC4LP0CB38 370 aaKnown RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 IL12BP29460 328 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 PGM1P36871 562 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 DCTP40126 519 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 SLC7A2P52569 658 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 NCALDP61601 193 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 RPS26P62854 115 aaKnown RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 SYPL1Q16563 259 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 EID3Q8N140 333 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 CYP4Z2PQ8N1L4 340 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 RMND5BQ96G75 393 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 MAGED4Q96JG8 741 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 FAM173AQ9BQD7 235 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 NUP214P35658 2090 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 ELOVL7A1L3X0 281 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 MFN2O95140 757 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 CD247P20963 164 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 KRT20P35900 424 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 ZNF169Q14929 603 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 ZNF324BQ6AW86 544 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 TNFAIP8L2Q6P589 184 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 ZNF440Q8IYI8 595 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 OR10A6Q8NH74 314 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 EXTL1Q92935 676 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 ECSITQ9BQ95 431 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 SLC39A3Q9BRY0 314 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 THUMPD3Q9BV44 507 aaKnown RBP12.15□□□□□ -0.46
USP44-202ENST00000393091 PINK1Q9BXM7 581 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 LAT2Q9GZY6 243 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 LRFN1Q9P244 771 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
USP44-202ENST00000393091 NCKAP5O14513 1909 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 HS6ST1O60243 411 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ICOSLGO75144 302 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 NUDT7P0C024 238 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 NID1P14543 1247 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 FBXW4P57775 412 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 GANABQ14697 944 aaKnown RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 ZAR1Q86SH2 424 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 GRHL3Q8TE85 626 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 DUS3LQ96G46 650 aaKnown RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 PCDHAC1Q9H158 963 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 MAGEL2Q9UJ55 1249 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 WDR45Q9Y484 360 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 BSNQ9UPA5 3926 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 KIAA1549Q9HCM3 1950 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 GSC2O15499 205 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 FMO6PO60774 539 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 CD46P15529 392 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ELAVL4P26378 380 aaKnown RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 PLAURQ03405 335 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 CEACAM7Q14002 265 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 LCN8Q6JVE9 175 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ZNF607Q96SK3 696 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 RSPO3Q9BXY4 272 aaPredicted RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ZBTB20Q9HC78 741 aaPredicted RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 PLSCR2Q9NRY7 297 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 FBXO34Q9NWN3 711 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 CHST2Q9Y4C5 530 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 WIF1Q9Y5W5 379 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 A0A1B0GVC2 190 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 NTN1O95631 604 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 CLK3P49761 638 aaKnown RBP12.14□□□□□ -0.47
USP44-202ENST00000393091 DEFB107AQ8IZN7 70 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 TMEM156Q8N614 296 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 XAGE5Q8WWM1 108 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ASB9Q96DX5 294 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 ACTR3BQ9P1U1 418 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
USP44-202ENST00000393091 A0A087WZY1 265 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 ACOT8O14734 319 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 FCMRO60667 390 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 CHRNEQ04844 493 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms