RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TBL1XR1Q9BZK7 514 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 NMUR2Q9GZQ4 415 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 SAP130Q9H0E3 1048 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 ZDHHC11Q9H8X9 412 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 MTHFD2LQ9H903 347 aaPredicted RBP6.19□□□□□ -1.42
UBBP1-201ENST00000392399 ACKR4Q9NPB9 350 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 GID8Q9NWU2 228 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 TUBA8Q9NY65 449 aaPredicted RBP6.19□□□□□ -1.42
UBBP1-201ENST00000392399 CALML5Q9NZT1 146 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 NTNG1Q9Y2I2 539 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 MRPS18CQ9Y3D5 142 aaKnown RBP6.19□□□□□ -1.42
UBBP1-201ENST00000392399 WIF1Q9Y5W5 379 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 SPENQ96T58 3664 aaKnown RBP6.19□□□□□ -1.42
UBBP1-201ENST00000392399 HELZ2Q9BYK8 2649 aaKnown RBP6.19□□□□□ -1.42
UBBP1-201ENST00000392399 POLEQ07864 2286 aa6.19□□□□□ -1.42
UBBP1-201ENST00000392399 TRBV5-3A0A0A0MS03 114 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 LOC100653049A0A140TA62 436 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 HMGN4O00479 90 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SCDO00767 359 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 TFECO14948 347 aaPredicted RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SUSD5O60279 629 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 HCN1O60741 890 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 KRT34O76011 436 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 UNC5CO95185 931 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 CBX6O95503 412 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 OXSR1O95747 527 aaPredicted RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 IGKV1D-16P01601 117 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 BMP2P12643 396 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 GPX2P18283 190 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PRDX6P30041 224 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ADH7P40394 386 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PTGDSP41222 190 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 CRATP43155 626 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 RFX3P48380 749 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 TDGF1P3P51864 188 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 MVDP53602 400 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 GAS1P54826 345 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 DSTNP60981 165 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 HPCAP84074 193 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 NFYCQ13952 458 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ELOAQ14241 798 aaKnown RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ZSWIM7Q19AV6 140 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 TRMT5Q32P41 509 aaKnown RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 FLYWCH1Q4VC44 716 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 RUNDC3AQ59EK9 446 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 COLEC12Q5KU26 742 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 CCNJQ5T5M9 372 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PRAMEF8Q5VWM4 474 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PRAMEF7Q5VXH5 474 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 DESI1Q6ICB0 168 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ARHGAP11AQ6P4F7 1023 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 TNFAIP8L2Q6P589 184 aaPredicted RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 FIGNL1Q6PIW4 674 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 LRRC74BQ6ZQY2 392 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PLCZ1Q86YW0 608 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 GHDCQ8N2G8 530 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 FAM109AQ8N4B1 249 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 TMEM251Q8N6I4 163 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 WDSUB1Q8N9V3 476 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 OR4C3Q8NH37 302 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 FBXO30Q8TB52 745 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ROPN1LQ96C74 230 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ANKRD27Q96NW4 1050 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 GNRHR2Q96P88 292 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 LRRC37BQ96QE4 947 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 CGREF1Q99674 301 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 CCDC106Q9BWC9 280 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 ZNF350Q9GZX5 532 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 MYLK2Q9H1R3 596 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 UBQLN3Q9H347 655 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SERHL2Q9H4I8 314 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 PTGES2Q9H7Z7 377 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 EFCAB1Q9HAE3 211 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SLC6A13Q9NSD5 602 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SLC25A37Q9NYZ2 338 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 VAPAQ9P0L0 249 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SLAMF8Q9P0V8 285 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 P2RX2Q9UBL9 471 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SEC14L3Q9UDX4 400 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 AP3M1Q9Y2T2 418 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 WDR45Q9Y484 360 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 DTNAQ9Y4J8 743 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 KCNE3Q9Y6H6 103 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 FLNCQ14315 2725 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 NINQ8N4C6 2090 aa6.18□□□□□ -1.42
UBBP1-201ENST00000392399 SVILO95425 2214 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 UBR5O95071 2799 aaPredicted RBP6.17□□□□□ -1.42
UBBP1-201ENST00000392399 FASNP49327 2511 aaKnown RBP6.17□□□□□ -1.42
UBBP1-201ENST00000392399 IGLV3-32A0A0A0MS00 114 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 A0A0G2JPF8 293 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 A0A1B0GVC2 190 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 PINLYPA6NC86 204 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 OR14I1A6ND48 311 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 ANKUB1A6NFN9 424 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 LRRC3CA6NJW4 275 aa6.17□□□□□ -1.42
UBBP1-201ENST00000392399 HNRNPCL2B2RXH8 293 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms