RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 CCDC182A6NF36 153 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 MRPS14O60783 128 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 TYRP1P17643 537 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 CELP19835 753 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 PTBP1P26599 531 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 MMP12P39900 470 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 WASP42768 502 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 CCT3P49368 545 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 POLR2LP62875 67 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 FUT5Q11128 374 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 TIMM50Q3ZCQ8 353 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 PIP5KL1Q5T9C9 394 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 SLX4IPQ5VYV7 408 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 VRK2Q86Y07 508 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 LRRC56Q8IYG6 542 aaPredicted RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 UPRTQ96BW1 309 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 TMCO6Q96DC7 493 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 ZBED6CLQ96FA7 236 aaPredicted RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 PDXPQ96GD0 296 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 MND1Q9BWT6 205 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 CPEB1Q9BZB8 566 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 ZDHHC5Q9C0B5 715 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 AICDAQ9GZX7 198 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 RIMS4Q9H426 269 aaPredicted RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 SRA1Q9HD15 236 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
CCDC57-205ENST00000392346 MAU2Q9Y6X3 613 aa10.82□□□□□ -0.68
CCDC57-205ENST00000392346 TRAV20A0A0B4J274 112 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 A0A1W2PPK0 400 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 OTOL1A6NHN0 477 aaPredicted RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 CASKO14936 926 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 OR1F1O43749 312 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 LANCL1O43813 399 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TIE1P35590 1138 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 HMGA2P52926 109 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TRA2BP62995 288 aaKnown RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 IL18Q14116 193 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 GLYR1Q49A26 553 aaPredicted RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 GPAT3Q53EU6 434 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 YOD1Q5VVQ6 348 aaPredicted RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 PLPP4Q5VZY2 271 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SMARCD3Q6STE5 483 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TIGD4Q8IY51 512 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 ENKURQ8TC29 256 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 GANCQ8TET4 914 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SLC25A46Q96AG3 418 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TEFMQ96QE5 360 aaKnown RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 PARD6GQ9BYG4 376 aaPredicted RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SPACA1Q9HBV2 294 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 CNOT2Q9NZN8 540 aaKnown RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TBC1D29Q9UFV1 150 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 KCND3Q9UK17 655 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 PLEKHM1Q9Y4G2 1056 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TRANK1O15050 2925 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 PGRMC2O15173 223 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 RB1P06400 928 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 S100A9P06702 114 aaKnown RBP10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TBXA2RP21731 343 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 UQCRC2P22695 453 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 ETV6P41212 452 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 ERV3-1Q14264 604 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 LTB4RQ15722 352 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 TMEM107Q6UX40 140 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 PRICKLE2Q7Z3G6 844 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 NR2C2APQ86WQ0 139 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 CPXM2Q8N436 756 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 CCDC32Q9BV29 185 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 FNDC11Q9BVV2 318 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 EVA1AQ9H8M9 152 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 BEX1Q9HBH7 125 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SPHK2Q9NRA0 654 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 GIMAP4Q9NUV9 329 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 SPATA2Q9UM82 520 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 POLHQ9Y253 713 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 ALG5Q9Y673 324 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 COL4A3Q01955 1670 aa10.81□□□□□ -0.68
CCDC57-205ENST00000392346 VPS13AQ96RL7 3174 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 CENPVL1A0A0U1RR11 272 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 MAGEB4O15481 346 aaPredicted RBP10.8□□□□□ -0.68
CCDC57-205ENST00000392346 DNAJB6O75190 326 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 ADAP00813 363 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 PCCBP05166 539 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 HSD3B1P14060 373 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 GNSP15586 552 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 SLC7A9P82251 487 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 CAMK1Q14012 370 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 GFOD2Q3B7J2 385 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 SLC35F1Q5T1Q4 408 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 C12orf73Q69YU5 71 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 ZNF793Q6ZN11 406 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.8□□□□□ -0.68
CCDC57-205ENST00000392346 OR8K5Q8NH50 307 aa10.8□□□□□ -0.68
CCDC57-205ENST00000392346 C9orf43Q8TAL5 461 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms