RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 ELK4P28324 431 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 CASQ1P31415 396 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 CCKARP32238 428 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 THBS2P35442 1172 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 NCBP2P52298 156 aaKnown RBP eCLIP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 ZNF155Q12901 538 aaPredicted RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 NRF1Q16656 503 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 ZNF678Q5SXM1 525 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 OR5M10Q6IEU7 315 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 NPSR1Q6W5P4 371 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 STAC2Q6ZMT1 411 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 MTERF4Q7Z6M4 381 aaKnown RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 P2RY8Q86VZ1 359 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 NATD1Q8N6N6 113 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 CDRT4Q8N9R6 151 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 ZFP28Q8NHY6 868 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 C16orf78Q8WTQ4 265 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 DCAKDQ8WVC6 231 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 TMEM158Q8WZ71 300 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 CPNE4Q96A23 557 aaPredicted RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 EXOSC8Q96B26 276 aaKnown RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 EFHD2Q96C19 240 aaPredicted RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 ACTR6Q9GZN1 396 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 HOXD1Q9GZZ0 328 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 RRAGDQ9NQL2 400 aaPredicted RBP8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 GIN1Q9NXP7 522 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 HEY2Q9UBP5 337 aa8.66□□□□□ -1.02
TPM3P6-201ENST00000391998 FN1P02751 2386 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 A0A087WUV0 522 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 A0A1W2PQD3 144 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 A8MT66 165 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 INAFM1C9JVW0 142 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 NPIPB8E9PQR5 432 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 H3BML4 177 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 OVOL3O00110 214 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 UPK1AO00322 258 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SMAD7O15105 426 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SEC14L5O43304 696 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 NDUFB5O43674 189 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SCO2O43819 266 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 RSL1D1O76021 490 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ANGPTL1O95841 491 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 PRPS2P11908 318 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 BMP4P12644 408 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 FKBP2P26885 142 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ZNF41P51814 821 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SUCLG1P53597 346 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 PRKAA2P54646 552 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 CDH13P55290 713 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SUMO3P55854 103 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SIRPAP78324 504 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 SLC29A2Q14542 456 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 LTB4RQ15722 352 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 CLEC12BQ2HXU8 276 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 GLE1Q53GS7 698 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 C8orf74Q6P047 294 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TRABD2AQ86V40 505 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TDRPQ86YL5 185 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 CIARTQ8N365 385 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 CDYL2Q8N8U2 506 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ZNF527Q8NB42 609 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 OR7G2Q8NG99 324 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 HOXB13Q92826 284 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 KAT2AQ92830 837 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ELP4Q96EB1 424 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 L3HYPDHQ96EM0 354 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ZBED6CLQ96FA7 236 aaPredicted RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 PAFAH2Q99487 392 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ACPTQ9BZG2 426 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 MYNNQ9NPC7 610 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 UBQLN4Q9NRR5 601 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 FARSBQ9NSD9 589 aaKnown RBP8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TMEM160Q9NX00 188 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 MED11Q9P086 117 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 NTMQ9P121 344 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 RNF115Q9Y4L5 304 aa8.65□□□□□ -1.02
TPM3P6-201ENST00000391998 TRIM64A6NGJ6 449 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 TRIM64BA6NI03 449 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 H3BNH8 94 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 TBX19O60806 448 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 OR4F21O95013 312 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 UTS2O95399 124 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 CD3EP07766 207 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 PAX7P23759 505 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 RPL3P39023 403 aaKnown RBP8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 CLDN20P56880 219 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 CARD18P57730 90 aa8.64□□□□□ -1.03
TPM3P6-201ENST00000391998 ETF1P62495 437 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms