RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 KCNE5Q9UJ90 142 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 USP22Q9UPT9 525 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 PCDHGB6Q9Y5F9 930 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 EML6Q6ZMW3 1958 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 C15orf38-AP3S2A0A0A6YYH1 394 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 ANKRD33BA6NCL7 494 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 PRAMEF25A6NGN4 478 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 NPIPB9F8W1W9 429 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 ADAM10O14672 748 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 PEX1O43933 1283 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 HS6ST1O60243 411 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 OXSR1O95747 527 aaPredicted RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 GUSBP08236 651 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 CNR1P21554 472 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 TBXA2RP21731 343 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 LCN1P31025 176 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 DCTP40126 519 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 GAS1P54826 345 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 RPP38P78345 283 aaKnown RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 HPCAP84074 193 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 MAPK14Q16539 360 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 RPS26P11Q5JNZ5 115 aaPredicted RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 TMEM81Q6P7N7 255 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 HMGN2P46Q86SG4 172 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 ZZZ3Q8IYH5 903 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 TEX19Q8NA77 164 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 Q8NA96 180 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 POGLUT1Q8NBL1 392 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 NFKBIDQ8NI38 313 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 BBC3Q96PG8 261 aaPredicted RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 ANGPTL4Q9BY76 406 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 QRSL1Q9H0R6 528 aaKnown RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 SPAG4Q9NPE6 437 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 POLE3Q9NRF9 147 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 UBQLN4Q9NRR5 601 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 KLRF1Q9NZS2 232 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 TMEM181Q9P2C4 612 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 ABCD2Q9UBJ2 740 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 KLF13Q9Y2Y9 288 aaPredicted RBP11.6□□□□□ -0.55
SMN1-202ENST00000380707 L3MBTL1Q9Y468 752 aa11.6□□□□□ -0.55
SMN1-202ENST00000380707 PINLYPA6NC86 204 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 C17orf51A8MQB3 221 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 KIAA0513O60268 411 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 UGT2B17O75795 530 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 NGFRP08138 427 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 DNASE1L1P49184 302 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 RNF144AP50876 292 aaPredicted RBP11.59□□□□□ -0.55
SMN1-202ENST00000380707 CRISP3P54108 245 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 ATP12AP54707 1039 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 CDK6Q00534 326 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 LIPEQ05469 1076 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 KLRB1Q12918 225 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 BNIP1Q12981 228 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 SNTA1Q13424 505 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 SCARB2Q14108 478 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 GNA13Q14344 377 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 INPP5JQ15735 1006 aaPredicted RBP11.59□□□□□ -0.55
SMN1-202ENST00000380707 ZNF630Q2M218 657 aaPredicted RBP11.59□□□□□ -0.55
SMN1-202ENST00000380707 KLHL26Q53HC5 615 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 REEP3Q6NUK4 255 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 C16orf89Q6UX73 402 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.59□□□□□ -0.55
SMN1-202ENST00000380707 MARCH3Q86UD3 253 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 DEFB107AQ8IZN7 70 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 PGAM4Q8N0Y7 254 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 TMEM178AQ8NBL3 297 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 DOHHQ9BU89 302 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 HOXD1Q9GZZ0 328 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 MTHFD2LQ9H903 347 aaPredicted RBP11.59□□□□□ -0.55
SMN1-202ENST00000380707 TAS2R1Q9NYW7 299 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 ABCG2Q9UNQ0 655 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 PCDHGA10Q9Y5H3 936 aa11.59□□□□□ -0.55
SMN1-202ENST00000380707 A0A0G2JPF8 293 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 HNRNPCL2B2RXH8 293 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 HNRNPCL3B7ZW38 293 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 ALG1L2C9J202 215 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 C5orf58C9J3I9 102 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 KLRC4-KLRK1H3BQV0 150 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 SCDO00767 359 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 SCO2O43819 266 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 HNRNPCL1O60812 293 aaKnown RBP11.58□□□□□ -0.56
SMN1-202ENST00000380707 TRIM3O75382 744 aaPredicted RBP11.58□□□□□ -0.56
SMN1-202ENST00000380707 PGM3O95394 542 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 HNRNPCL4P0DMR1 293 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 RFC3P40938 356 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 MEOX1P50221 254 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 KCNJ2P63252 427 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 PMP22Q01453 160 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 RBBP4Q09028 425 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 FOXO1Q12778 655 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 ZNF141Q15928 474 aa11.58□□□□□ -0.56
SMN1-202ENST00000380707 TBCELQ5QJ74 424 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms