RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GALNSP34059 522 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 NPSR1Q6W5P4 371 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF730Q6ZMV8 503 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 AHSA2Q719I0 299 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PRICKLE2Q7Z3G6 844 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 GDF7Q7Z4P5 450 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 NKAIN4Q8IVV8 208 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 C16orf52Q8NHV5 167 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 IPCEF1Q8WWN9 437 aaPredicted RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 FKBP10Q96AY3 582 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 SLC41A3Q96GZ6 507 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PELOQ9BRX2 385 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF304Q9HCX3 659 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 CCNB1IP1Q9NPC3 277 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 C11orf16Q9NQ32 467 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 VPS13AQ96RL7 3174 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 C17orf105B2RV13 164 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 OR5F1O95221 314 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MT-ND2P03891 347 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ITIH1P19827 911 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 DCKP27707 260 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ALDH6A1Q02252 535 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 SQSTM1Q13501 440 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 TUBA3CQ13748 450 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 DSG2Q14126 1118 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MFSD4BQ5TF39 518 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PTCHD4Q6ZW05 846 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MED25Q71SY5 747 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MEX3DQ86XN8 651 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF615Q8N8J6 731 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 RCBTB1Q8NDN9 531 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 OR2I1PQ8NGU4 316 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MUL1Q969V5 352 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 ZC3H10Q96K80 434 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 DPYSL5Q9BPU6 564 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 LIN28AQ9H9Z2 209 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 PNO1Q9NRX1 252 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 MMACHCQ9Y4U1 282 aa18.4■□□□□ 0.54
PDLIM5-205ENST00000380180 A0A1W2PQM1 296 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PATE3B3GLJ2 98 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF701M0R085 212 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 DSCR3O14972 297 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 TOX3O15405 576 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 BCAS1O75363 584 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 CT45A8P0DMV1 189 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 CT45A9P0DMV2 189 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 MAP2K4P45985 399 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 NUDT6P53370 316 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 CCL7P80098 99 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 TEKQ02763 1124 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 MINDY4Q4G0A6 757 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 CT45A2Q5DJT8 189 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PEAR1Q5VY43 1037 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 SLX4IPQ5VYV7 408 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 RRM2BQ7LG56 351 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 RANBP3LQ86VV4 465 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 EID2Q8N6I1 236 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PTPMT1Q8WUK0 201 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 FAR1Q8WVX9 515 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 NAA50Q9GZZ1 169 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PSORS1C1Q9UIG5 152 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 HEATR5AQ86XA9 2040 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 INMTO95050 263 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 NNATQ16517 81 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 DECR1Q16698 335 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 VWA2Q5GFL6 755 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PDZK1Q5T2W1 519 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 C1orf189Q5VU69 101 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 PRSS48Q7RTY5 328 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 FAM181AQ8N9Y4 354 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF420Q8TAQ5 688 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 ACOT11Q8WXI4 607 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 C12orf43Q96C57 262 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 MPP4Q96JB8 637 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 SIGLEC11Q96RL6 698 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 ARMC7Q9H6L4 198 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 Q9N2J8 555 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 SLC7A7Q9UM01 511 aa18.39■□□□□ 0.53
PDLIM5-205ENST00000380180 ENO4A6NNW6 628 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 MPZL2O60487 215 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 MRPS14O60783 128 aaKnown RBP18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 CLPSP04118 112 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 RPLP0P05388 317 aaKnown RBP18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 GUSBP08236 651 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 GSTM3P21266 225 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 FBLP22087 321 aaKnown RBP18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 HTR2AP28223 471 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 IFNGR2P38484 337 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 PLAURQ03405 335 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 ALDH16A1Q8IZ83 802 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 GNPDA2Q8TDQ7 276 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 GGHQ92820 318 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 TSLPQ969D9 159 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 SENP5Q96HI0 755 aaPredicted RBP18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 COPS4Q9BT78 406 aa18.38■□□□□ 0.53
PDLIM5-205ENST00000380180 IGKV3D-11A0A0A0MRZ8 115 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 A0A1B0GX78 115 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 CLCA1A8K7I4 914 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 A8MUA0 341 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF99A8MXY4 864 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms