RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CHST11Q9NPF2 352 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 RXFP3Q9NSD7 469 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ABCA2Q9BZC7 2435 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C1orf226A1L170 272 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 AREL1O15033 823 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DNAJB5O75953 348 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SOX30O94993 753 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 RENP00797 406 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ADRB1P08588 477 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CKMT1AP12532 417 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 AKR1D1P51857 326 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CD83Q01151 205 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 MALLQ13021 153 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 IHHQ14623 411 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SSPNQ14714 243 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SLC14A2Q15849 920 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DNM1P34Q6PK57 102 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CPEB2Q7Z5Q1 589 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SETD6Q8TBK2 473 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ISL2Q96A47 359 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 AMDHD1Q96NU7 426 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 VPS35Q96QK1 796 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SERINC2Q96SA4 455 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 KIR3DX1Q9H7L2 352 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 APMAPQ9HDC9 416 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PAQR5Q9NXK6 330 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 IFT52Q9Y366 437 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C2orf72A6NCS6 295 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CDX4O14627 284 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PPM1DO15297 605 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 XPNPEP2O43895 674 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CRYAAP02489 173 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CD1DP15813 335 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF26P17031 533 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 KIR2DL1P43626 348 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 VLDLRP98155 873 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C5orf22Q49AR2 442 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SPIN4Q56A73 249 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C6orf120Q7Z4R8 191 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PM20D2Q8IYS1 436 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TP53INP1Q96A56 240 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 FCRL4Q96PJ5 515 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DCLRE1CQ96SD1 692 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 WDR12Q9GZL7 423 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 NOSIPQ9Y314 301 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 MAGED1Q9Y5V3 778 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 NOTCH3Q9UM47 2321 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 GGT3PA6NGU5 568 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 C21orf140B9A014 251 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PSMD9O00233 223 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CST1P01037 141 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PRLP01236 227 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ZGLP1P0C6A0 271 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 FDXRP22570 491 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PRKACGP22612 351 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SNRPD2P62316 118 aaKnown RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CSNK2BP67870 215 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RASGEF1BQ0VAM2 473 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 GCNT6Q5T4J0 391 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TMEM107Q6UX40 140 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CD163Q86VB7 1156 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 OR13J1Q8NGT2 312 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SGCDQ92629 289 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 MTERF3Q96E29 417 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 NUAK2Q9H093 628 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RBM38Q9H0Z9 239 aaKnown RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SLITRK2Q9H156 845 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TREX1Q9NSU2 369 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 C14orf119Q9NWQ9 140 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CMTM6Q9NX76 183 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TCFL5Q9UL49 500 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TP53TG5Q9Y2B4 290 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 DHRS7Q9Y394 339 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ARID2Q68CP9 1835 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 M0R1B8 84 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 FAM20BO75063 409 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 FCGR2AP12318 317 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PRF1P14222 555 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 FMO3P31513 532 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 IDUAP35475 653 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CSNK1DP48730 415 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ERVPABLB-1P60509 514 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PLGLAQ15195 96 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 C18orf21Q32NC0 220 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RAB41Q5JT25 222 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ALG1LQ6GMV1 187 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 OR4C11Q6IEV9 310 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF549Q6P9A3 640 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 GDF7Q7Z4P5 450 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SPATA19Q7Z5L4 167 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 B3GNT8Q7Z7M8 397 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 OR56A1Q8NGH5 318 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 OR10A6Q8NH74 314 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 NUDT8Q8WV74 236 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CLDN23Q96B33 292 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF845Q96IR2 970 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RANBP9Q96S59 729 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms