RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 PPP3R1P63098 170 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 TMEM35AQ53FP2 167 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 FAM27D1Q5T7N8 215 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 FAM109BQ6ICB4 259 aaPredicted RBP16.93■□□□□ 0.3
SF1-203ENST00000377387 VITQ6UXI7 678 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 MTSS1LQ765P7 747 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 YIPF7Q8N8F6 280 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 OR7G2Q8NG99 324 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 TNFRSF10DQ9UBN6 386 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 CES1P1Q9UKY3 287 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 ZFR2Q9UPR6 939 aaKnown RBP16.93■□□□□ 0.3
SF1-203ENST00000377387 ALG5Q9Y673 324 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 REM1O75628 298 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 HNRNPA1P09651 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
SF1-203ENST00000377387 PEBP1P30086 187 aaKnown RBP16.93■□□□□ 0.3
SF1-203ENST00000377387 SNRPD2P62316 118 aaKnown RBP16.93■□□□□ 0.3
SF1-203ENST00000377387 SIM1P81133 766 aaPredicted RBP16.93■□□□□ 0.3
SF1-203ENST00000377387 ZIC1Q15915 447 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 AADACL4Q5VUY2 407 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 TMEM64Q6YI46 380 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 RFKQ969G6 155 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 HDAC8Q9BY41 377 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 TTTY10Q9BZA0 68 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 CLEC4AQ9UMR7 237 aa16.93■□□□□ 0.3
SF1-203ENST00000377387 ZNF860A6NHJ4 632 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 SLC31A1O15431 190 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 PROM1O43490 865 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 HLA-DPB1P04440 258 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 MRPL3P09001 348 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 PRG2P13727 222 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 SEC13P55735 322 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 DSG2Q14126 1118 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 CST6Q15828 149 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 PGGHGQ32M88 737 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 THOC7Q6I9Y2 204 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 MRM1Q6IN84 353 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 TTLQ8NG68 377 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 ACOT11Q8WXI4 607 aaPredicted RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 OSTF1Q92882 214 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 HDHD2Q9H0R4 259 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 PPP1R3EQ9H7J1 279 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 TRIM45Q9H8W5 580 aaPredicted RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 ATP13A2Q9NQ11 1180 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 MRPS18AQ9NVS2 196 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 CBLCQ9ULV8 474 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 SIRT4Q9Y6E7 314 aaPredicted RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 TRDV1A0A1B0GX56 115 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 BTN3A3O00478 584 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 AKAP8O43823 692 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 SDHBP21912 280 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 PKLRP30613 574 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 RPS7P62081 194 aaKnown RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 ZNF485Q8NCK3 441 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 FGF13Q92913 245 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 ARHGDIGQ99819 225 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 MED18Q9BUE0 208 aa16.92■□□□□ 0.3
SF1-203ENST00000377387 PHPT1Q9NRX4 125 aaPredicted RBP16.92■□□□□ 0.3
SF1-203ENST00000377387 C12orf71A8MTZ7 269 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 YES1P07947 543 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 ZNF888P0CJ79 500 aaPredicted RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 SGCGQ13326 291 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 C1orf53Q5VUE5 145 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 OR2L8Q8NGY9 312 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 TEX101Q9BY14 249 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 RNF32Q9H0A6 362 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 RPRD1BQ9NQG5 326 aaKnown RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 WDR45Q9Y484 360 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 IRGMA1A4Y4 181 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 LYRM1O43325 122 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 FGF9P31371 208 aaPredicted RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 EVX1P49640 407 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 RNASE12Q5GAN4 147 aaKnown RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 CXXC5Q7LFL8 322 aaKnown RBP16.91■□□□□ 0.3
SF1-203ENST00000377387 POGLUT1Q8NBL1 392 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 OR14C36Q8NHC7 312 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 SFXN5Q8TD22 340 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 RAB7BQ96AH8 199 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 RNF170Q96K19 258 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 ASB16Q96NS5 453 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 HCAR1Q9BXC0 346 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 TEX12Q9BXU0 123 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 OR51V1Q9H2C8 321 aa16.91■□□□□ 0.3
SF1-203ENST00000377387 A0A0G2JMP0 313 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 A0A0X1KG70 313 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 KAT7O95251 611 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 PRKAR1AP10644 381 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 CHRNB1P11230 501 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 PAICSP22234 425 aaKnown RBP16.9■□□□□ 0.3
SF1-203ENST00000377387 PDGFRLQ15198 375 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 DUSP6Q16828 381 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 DEFB134Q4QY38 66 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 ZNF620Q6ZNG0 422 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 TMEM91Q6ZNR0 172 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 NR2C2APQ86WQ0 139 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 GHDCQ8N2G8 530 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 ARIH2OSQ8N7S6 290 aa16.9■□□□□ 0.3
SF1-203ENST00000377387 TMEM99Q8N816 258 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms