RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 UCHL1P09936 223 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 ACPPP15309 386 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 UGT2B7P16662 529 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 NKX3-2P78367 333 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 PLGLAQ15195 96 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 OR9Q2Q8NGE9 314 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 OR5K2Q8NHB8 316 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 HINT2Q9BX68 163 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 MYNNQ9NPC7 610 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 GPR83Q9NYM4 423 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 COPZ2Q9P299 210 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 ABCG2Q9UNQ0 655 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 ANKRD28O15084 1053 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SIGLEC6O43699 453 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 F11P03951 625 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 DEFA5Q01523 94 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 GNMTQ14749 295 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 DEFB123Q8N688 67 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 USB1Q9BQ65 265 aaKnown RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 TREX1Q9NSU2 369 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 IVDP26440 423 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 PRDX3P30048 256 aaKnown RBP12.83□□□□□ -0.35
GPC6-201ENST00000377047 MAB21L1Q13394 359 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 ZNF791Q3KP31 576 aaPredicted RBP12.83□□□□□ -0.35
GPC6-201ENST00000377047 LMNTD1Q8N9Z9 388 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 GRPEL2Q8TAA5 225 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 TMEM68Q96MH6 324 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 MGLLQ99685 303 aa12.83□□□□□ -0.35
GPC6-201ENST00000377047 MYEF2Q9P2K5 600 aaKnown RBP12.83□□□□□ -0.35
GPC6-201ENST00000377047 MYH10P35580 1976 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 CNR2P34972 360 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 CSNK1A1P48729 337 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 METTL2BQ6P1Q9 378 aaKnown RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 CYB561A3Q8NBI2 242 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 TUBA1CQ9BQE3 449 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 M0R036 132 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 SCGB2A1O75556 95 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 IFNA7P01567 189 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 OSMP13725 252 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 MICAQ29983 383 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 TRIM46Q7Z4K8 759 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 PRR18Q8N4B5 295 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 OR4K3Q96R72 315 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 TWSG1Q9GZX9 223 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 ENKD1Q9H0I2 346 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 IER3IP1Q9Y5U9 82 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 H0YGG7 62 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 RAD1O60671 282 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 CAPN3P20807 821 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PITPNBP48739 271 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 KCNN3Q9UGI6 736 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 BOKQ9UMX3 212 aaPredicted RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 STUB1Q9UNE7 303 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 BLACEA4D250 179 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 GABRR3A8MPY1 467 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PET100P0DJ07 73 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PCGF2P35227 344 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 SELENOWP63302 87 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PIGGQ5H8A4 983 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 PAGE3Q5JUK9 113 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 RNF175Q8N4F7 328 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 ARRDC2Q8TBH0 407 aa12.83□□□□□ -0.36
GPC6-201ENST00000377047 ZNF431Q8TF32 576 aaPredicted RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
GPC6-201ENST00000377047 A0A1B0GTW7 788 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ISPDA4D126 451 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HIST1H1TP22492 207 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 IDUAP35475 653 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ARL3P36405 182 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 TMEM151AQ8N4L1 468 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ZMYND19Q96E35 227 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 ARL5BQ96KC2 179 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 LMF1Q96S06 567 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 A0A1W2PPW3 197 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 NME4O00746 187 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ACTL6BO94805 426 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 TNFSF4P23510 183 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 IRS1P35568 1242 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CHRNEQ04844 493 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 FAM76BQ5HYJ3 339 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CCNJQ5T5M9 372 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PARM1Q6UWI2 310 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 KDM1BQ8NB78 822 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR13J1Q8NGT2 312 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms