RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ACOT13Q9NPJ3 140 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 LOC102725191A0A1B0GVB3 256 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FAM155AB1AL88 458 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 F5H5P2 479 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 PITPNBP48739 271 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 OR4C11Q6IEV9 310 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 OR8J1Q8NGP2 316 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DDX1Q92499 740 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DPH2Q9BQC3 489 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CACNG6Q9BXT2 260 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 RABIFP47224 123 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 UNC5DQ6UXZ4 953 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF704Q6ZNC4 412 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 TMEM150AQ86TG1 271 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ZFP82Q8N141 532 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FUNDC2Q9BWH2 189 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 APOBEC3BQ9UH17 382 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CHRNB1P11230 501 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 SFTPDP35247 375 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ETV5P41161 510 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 NPBWR1P48145 328 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 EEF1A1P68104 462 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 PLBD1Q6P4A8 553 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 KBTBD6Q86V97 674 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DNAJC22Q8N4W6 341 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 MS4A15Q8N5U1 240 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 OR9A2Q8NGT5 310 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 MUS81Q96NY9 551 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 C6orf136Q5SQH8 315 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 MPP7Q5T2T1 576 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 SLC35F2Q8IXU6 374 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DRAXINQ8NBI3 349 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FAM83FQ8NEG4 500 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 MAN2B1O00754 1011 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DVL2O14641 736 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 KITLGP21583 273 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 TGFBR3Q03167 851 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 HES5Q5TA89 166 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CHFRQ96EP1 664 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 A6NIZ1 184 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 RAP1BP61224 184 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 RAP1AP62834 184 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MSS51Q4VC12 460 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ENPP6Q6UWR7 440 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PTERQ96BW5 349 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CCNL2Q96S94 520 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PRRT1Q99946 306 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ST6GALNAC5Q9BVH7 336 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 C1GALT1C1LP0DN25 315 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SFT2D3Q587I9 215 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 HMGN2P46Q86SG4 172 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PPP1R35Q8TAP8 253 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PCNX1Q96RV3 2341 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 KCNAB2Q13303 367 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SLC22A6Q4U2R8 563 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF75AQ96N20 296 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF223Q9UK11 482 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MTMR11A4FU01 709 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 F5H5K5 113 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 LAMTOR5O43504 91 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 LCATP04180 440 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MEF2DQ14814 521 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 TOMM40LQ969M1 308 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 B3GNT3Q9Y2A9 372 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MYOCOSA0A1B0GUC4 107 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ANHXE9PGG2 379 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CNTN5O94779 1100 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 HTR3AP46098 478 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SHC2P98077 582 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 DEFA6Q01524 100 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 EVX2Q03828 476 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 KIAA1211LQ6NV74 962 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CCBE1Q6UXH8 406 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF516Q92618 1163 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PRSS3P35030 304 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 FOLR3P41439 243 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PTPRCAPQ14761 206 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 CREB3L4Q8TEY5 395 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 C1orf74Q96LT6 269 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms