RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CRB3Q9BUF7 120 aa12.96□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM100Q9NV29 134 aa12.96□□□□□ -0.34
COL4A1-201ENST00000375820 SLC22A5O76082 557 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 P2RY2P41231 377 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 GAB1Q13480 694 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 IL17RDQ8NFM7 739 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 COG8Q96MW5 612 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 OR14J1Q9UGF5 321 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 GPR39O43194 453 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 NXPH3O95157 252 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 DRD2P14416 443 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 DNAJB1P25685 340 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 ERVK-16P61578 105 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 TAP2Q03519 686 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 POU4F3Q15319 338 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 RGNQ15493 299 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF423Q2M1K9 1284 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 BORCS7Q96B45 105 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 MICU1Q9BPX6 476 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SPO11Q9Y5K1 396 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SLIT3O75094 1523 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 IFNA10P01566 189 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 IL4RP24394 825 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 DLSTP36957 453 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 DSC1Q08554 894 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF619Q8N2I2 560 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SPTSSAQ969W0 71 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CA5BQ9Y2D0 317 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 PTRH2Q9Y3E5 179 aaKnown RBP12.95□□□□□ -0.34
COL4A1-201ENST00000375820 PCDHGA1Q9Y5H4 931 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 DVL2O14641 736 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 B4GAT1O43505 415 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 FAM189A1O60320 539 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 HPRP00739 348 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CHRM4P08173 479 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 ABOP16442 354 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF28P17035 718 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CDK2P24941 298 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 RPS5P46782 204 aaKnown RBP12.95□□□□□ -0.34
COL4A1-201ENST00000375820 LBX1P52954 281 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CLDN8P56748 225 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 NKX3-2P78367 333 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 PAGE3Q5JUK9 113 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 FAM3CQ92520 227 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 EPOP01588 193 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 GCH1P30793 250 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SSTP61278 116 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CNIH2Q6PI25 160 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 SMIM14Q96QK8 99 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 LPAR4Q99677 370 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 TP53TG5Q9Y2B4 290 aa12.95□□□□□ -0.34
COL4A1-201ENST00000375820 NPIPB15A6NHN6 443 aaPredicted RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 NME4O00746 187 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 GDF1P27539 372 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PLCXD3Q63HM9 321 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 Q6ZSR6 202 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 MCATQ8IVS2 390 aaKnown RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 TRAPPC13A5PLN9 417 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OXSR1O95747 527 aaPredicted RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PROS1P07225 676 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PVRP15151 417 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 RAB15P59190 212 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 HTD2P86397 168 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 KIAA1211LQ6NV74 962 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 FAM198BQ6UWH4 519 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PAQR8Q8TEZ7 354 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 ELMOD3Q96FG2 381 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OR2B2Q9GZK3 357 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 GPR50Q13585 617 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 TMEFF1Q8IYR6 380 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 IGSF5Q9NSI5 407 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM45AQ9NWC5 275 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PLEK2Q9NYT0 353 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OR5K4A6NMS3 321 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 F5H5P2 479 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 CBX7O95931 251 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PSMB5P28074 263 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 MICAQ29983 383 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 ACBD4Q8NC06 268 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OR14K1Q8NGZ2 314 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 MTHFD2LQ9H903 347 aaPredicted RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 RDH14Q9HBH5 336 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 DZANK1Q9NVP4 752 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 FAM183AA6NL82 134 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 FZD9O00144 591 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 SOCS6O14544 535 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 ARPC1BO15143 372 aaKnown RBP12.94□□□□□ -0.34
COL4A1-201ENST00000375820 HPGDSO60760 199 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 FECHP22830 423 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms