RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NMNAT1Q9HAN9 279 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 ACER3Q9NUN7 267 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 DOCK8Q8NF50 2099 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 LOC730098B7Z3J9 87 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 KAT7O95251 611 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 OSMP13725 252 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 DRD2P14416 443 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 CXCL2P19875 107 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 POU3F2P20265 443 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 PITPNBP48739 271 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TTPAP49638 278 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 SELENOPP49908 381 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 ZP1P60852 638 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 DHODHQ02127 395 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 MAP4K2Q12851 820 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 NFATC2Q13469 925 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 PUM1Q14671 1186 aaKnown RBP eCLIP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 OCLNQ16625 522 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 CTSL3PQ5NE16 218 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 LYPD4Q6UWN0 246 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TPRG1Q6ZUI0 275 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TOMM5Q8N4H5 51 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TCEANCQ8N8B7 351 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 WDR20Q8TBZ3 569 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 SELENOMQ8WWX9 145 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 MAL2Q969L2 176 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 SGK3Q96BR1 496 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TRMT61BQ9BVS5 477 aaKnown RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 FAM126AQ9BYI3 521 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 BCL2L14Q9BZR8 327 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 GAREM1Q9H706 876 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 CYSLTR2Q9NS75 346 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 FAM120CQ9NX05 1096 aaKnown RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 OR6C2Q9NZP2 312 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 ANKDD1BA6NHY2 528 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 H3BN98 237 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 SCN2BO60939 215 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 TFP02787 698 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 NFYAP23511 347 aaPredicted RBP11.4□□□□□ -0.59
C9orf3-203ENST00000375315 FCARP24071 287 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 RBMS1P29558 406 aaKnown RBP11.4□□□□□ -0.59
C9orf3-203ENST00000375315 KCNJ5P48544 419 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 HMGA2P52926 109 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 HFEQ30201 348 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 CD200R1LQ6Q8B3 271 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 BTN2A1Q7KYR7 527 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 PARS2Q7L3T8 475 aaKnown RBP11.4□□□□□ -0.59
C9orf3-203ENST00000375315 NAXDQ8IW45 347 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 OR56B4Q8NH76 319 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF251Q9BRH9 671 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 YIPF4Q9BSR8 244 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 NTMT1Q9BV86 223 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 CHIAQ9BZP6 476 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 TINAGL1Q9GZM7 467 aaPredicted RBP11.4□□□□□ -0.59
C9orf3-203ENST00000375315 SAP130Q9H0E3 1048 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 OSGEPL1Q9H4B0 414 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 DCAF16Q9NXF7 216 aa11.4□□□□□ -0.59
C9orf3-203ENST00000375315 C2orf16Q68DN1 1984 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PLSCR5A0PG75 271 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PRR23D1E9PI22 279 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 J3KTA2 159 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PCDH8O95206 1070 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 ADAP00813 363 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 HLA-DPB1P04440 258 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 ELFN1P0C7U0 828 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF806P0C7X5 589 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PRR23D2P0DMB1 279 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 TIMP2P16035 220 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 EPB42P16452 691 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SPAM1P38567 509 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 GDF5P43026 501 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 MC2RQ01718 297 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 OR2G6Q5TZ20 316 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SBSNQ6UWP8 590 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 DEF8Q6ZN54 512 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 MBOAT1Q6ZNC8 495 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF527Q8NB42 609 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 OR52N1Q8NH53 320 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 GEMIN6Q8WXD5 167 aaKnown RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 HSD17B8Q92506 261 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 C11orf24Q96F05 449 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 EQTNQ9NQ60 294 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 GSN-AS1Q9NRJ2 163 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 TAPBPO15533 448 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 RLN2P04090 185 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 C1SP09871 688 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SMIM6P0DI80 62 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 COX7A2P14406 83 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 MAT2AP31153 395 aaKnown RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PRKAR1BP31321 381 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SRP9P49458 86 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms