RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CENPOQ9BU64 300 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 MND1Q9BWT6 205 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 RNF167Q9H6Y7 350 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 EGLN3Q9H6Z9 239 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 CAPN10Q9HC96 672 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 CNIH4Q9P003 139 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SCN3AQ9NY46 2000 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 A0A1W2PPC4 97 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ARHGAP33O14559 1287 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 THEGLP0DJG4 465 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 NT5EP21589 574 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 S100A5P33763 92 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 LSSP48449 732 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 RPS3AP61247 264 aaKnown RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 CDK5Q00535 292 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 TSPAN31Q12999 210 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 C1DQ13901 141 aaKnown RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 GPR68Q15743 365 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 DUSP5Q16690 384 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ARHGAP11BQ3KRB8 267 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 SYT14P1Q58G82 188 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 WDR45BQ5MNZ6 344 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 MANEAQ5SRI9 462 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 FRRS1Q6ZNA5 592 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 PRSS41Q7RTY9 318 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF761Q86XN6 746 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 MFSD4AQ8N468 514 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 DOK4Q8TEW6 326 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 DIO2Q92813 273 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 FAM46AQ96IP4 442 aaKnown RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 TWSG1Q9GZX9 223 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ANKRD19PQ9H560 264 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 CLEC2DQ9UHP7 191 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF443Q9Y2A4 671 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 MRPS2Q9Y399 296 aaKnown RBP11.27□□□□□ -0.61
HMGCL-202ENST00000374487 CHST2Q9Y4C5 530 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 PCDHGA3Q9Y5H0 932 aa11.27□□□□□ -0.61
HMGCL-202ENST00000374487 DCDC2BA2VCK2 349 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SNTNA6NMZ2 147 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 MYL12BO14950 172 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SCG5P05408 212 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 ALOX5P09917 674 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CD27P26842 260 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SOX6P35712 828 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CCR5P51681 352 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 VSX2P58304 361 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 UBE2IP63279 158 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 TYW3Q6IPR3 259 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SLC23A3Q6PIS1 610 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CACTIN-AS1Q8N1I8 211 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 RSC1A1Q92681 617 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SLC38A2Q96QD8 506 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 TEX12Q9BXU0 123 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 PRRG3Q9BZD7 231 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 PLA2G12AQ9BZM1 189 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SAP130Q9H0E3 1048 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 PIGUQ9H490 435 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 METTL15A6NJ78 407 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 FGF17O60258 216 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 KIAA0513O60268 411 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 GPR75O95800 540 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 TYRP1P17643 537 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SHC2P98077 582 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 HHEXQ03014 270 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 EIF2B5Q13144 721 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 C1orf61Q13536 156 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 DECR1Q16698 335 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 KLHL22Q53GT1 634 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 EIPR1Q53HC9 387 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CLEC12AQ5QGZ9 265 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CCNJQ5T5M9 372 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF554Q86TJ5 538 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SNX29P2Q8IUI4 249 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 ACOT11Q8WXI4 607 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SLC41A3Q96GZ6 507 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF582Q96NG8 517 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 SDF2Q99470 211 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 POLR2J2Q9GZM3 115 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 EXOSC4Q9NPD3 245 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 STARD5Q9NSY2 213 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 CHCHD3Q9NX63 227 aaKnown RBP11.26□□□□□ -0.61
HMGCL-202ENST00000374487 C19orf53Q9UNZ5 99 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms