RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CXorf51AA0A1B0GTR3 108 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 ABHD14A-ACY1A0A1B0GW23 586 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 SURF4O15260 269 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 RGS9O75916 674 aaPredicted RBP13.85□□□□□ -0.19
COL9A2-202ENST00000372748 HRGP04196 525 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 ACSL1P33121 698 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 PPM1AP35813 382 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 STXBP1P61764 594 aaKnown RBP13.85□□□□□ -0.19
COL9A2-202ENST00000372748 TSPAN31Q12999 210 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 AANATQ16613 207 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 KLHL12Q53G59 568 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 GPR139Q6DWJ6 353 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 ARL9Q6T311 187 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 C12orf40Q86WS4 652 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 ZNF547Q8IVP9 402 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 NKAIN4Q8IVV8 208 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 CLEC4MQ9H2X3 399 aaPredicted RBP13.85□□□□□ -0.19
COL9A2-202ENST00000372748 GLIPR2Q9H4G4 154 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 LHX9Q9NQ69 397 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 C12orf4Q9NQ89 552 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 NKIRAS2Q9NYR9 191 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 CHST2Q9Y4C5 530 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 AUP1Q9Y679 476 aa13.85□□□□□ -0.19
COL9A2-202ENST00000372748 USP34Q70CQ2 3546 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 A0A0B4J203 849 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 POP7O75817 140 aaKnown RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 GNRH1P01148 92 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 DRD5P21918 477 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 TRHRP34981 398 aaPredicted RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 CLCNKAP51800 687 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 GRK1Q15835 563 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ZSWIM7Q19AV6 140 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SLC25A35Q3KQZ1 300 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SLC36A2Q495M3 483 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ESPNLQ6ZVH7 1005 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 FAM129CQ86XR2 697 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 VRK2Q86Y07 508 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 KRT78Q8N1N4 520 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 GNPDA2Q8TDQ7 276 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 UBE2E3Q969T4 207 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 DTD2Q96FN9 168 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 C16orf58Q96GQ5 468 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 RBP7Q96R05 134 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 HINT3Q9NQE9 182 aaKnown RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ASB6Q9NWX5 421 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 H2AFY2Q9P0M6 372 aaPredicted RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 TMEM5Q9Y2B1 443 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 TSPAN11A1L157 253 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 H7BY64 318 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SSNA1O43805 119 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 PIP5K1CO60331 668 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 LILRB5O75023 590 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ERAL1O75616 437 aaKnown RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 DNASE1P24855 282 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 THBS2P35442 1172 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 COL28A1Q2UY09 1125 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SFXN4Q6P4A7 337 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 FAM83HQ6ZRV2 1179 aaPredicted RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 CHMP1BQ7LBR1 199 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 MRGPREQ86SM8 312 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SIAH3Q8IW03 269 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 TOMM5Q8N4H5 51 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 LINC00471Q8N535 108 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 OR8K5Q8NH50 307 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SMAP2Q8WU79 429 aaPredicted RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 ACOT12Q8WYK0 555 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 PRAP1Q96NZ9 151 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 UBL7Q96S82 380 aaPredicted RBP13.84□□□□□ -0.19
COL9A2-202ENST00000372748 CACNG6Q9BXT2 260 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 KCNN2Q9H2S1 579 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 EQTNQ9NQ60 294 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 CBLCQ9ULV8 474 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 SCML1Q9UN30 329 aa13.84□□□□□ -0.19
COL9A2-202ENST00000372748 E9PI62 339 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 GPR171O14626 319 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 SPINT1O43278 529 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 MT-ND4P03905 459 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 HMGN2P05204 90 aaKnown RBP13.83□□□□□ -0.2
COL9A2-202ENST00000372748 NCBP2P52298 156 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL9A2-202ENST00000372748 CAMK2DQ13557 499 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 ZNF77Q15935 545 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 ZNF658BQ4V348 819 aaPredicted RBP13.83□□□□□ -0.2
COL9A2-202ENST00000372748 PLBD1Q6P4A8 553 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 SYT9Q86SS6 491 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 NRMQ8IXM6 262 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 TRMT10AQ8TBZ6 339 aaKnown RBP13.83□□□□□ -0.2
COL9A2-202ENST00000372748 LRRC3BQ96PB8 259 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 MACROD1Q9BQ69 325 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 C12orf10Q9HB07 376 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 PPIEQ9UNP9 301 aaKnown RBP13.83□□□□□ -0.2
COL9A2-202ENST00000372748 CEP290O15078 2479 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 A0A1W2PPK0 400 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 SLC9B1P1A6NJY1 282 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 PI15O43692 258 aa13.83□□□□□ -0.2
COL9A2-202ENST00000372748 FZD7O75084 574 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms