RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 F10P00742 488 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PENKP01210 267 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 HCKP08631 526 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 RNH1P13489 461 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 HSD11B1P28845 292 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TGFBR2P37173 567 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 MAP2K3P46734 347 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 RGS6P49758 472 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF91Q05481 1191 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PLCXD2Q0VAA5 305 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 RPA4Q13156 261 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SMU1Q2TAY7 513 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 BCL7AQ4VC05 210 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SERPINA11Q86U17 422 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TEX19Q8NA77 164 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SPPL3Q8TCT6 385 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZFYVE21Q9BQ24 234 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 GPN1Q9HCN4 374 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PDE7BQ9NP56 450 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ACTR10Q9NZ32 417 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DHCR7Q9UBM7 475 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 MRPS17Q9Y2R5 130 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 A0A1B0GV50 99 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZC3H12DA2A288 527 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ABLIM3O94929 683 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 AIFM1O95831 613 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PEX11BO96011 259 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CR2P20023 1033 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 GGT2P36268 569 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 LIPAP38571 399 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 MAGEA2P43356 314 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 DEFA5Q01523 94 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SNTB2Q13425 540 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CTU2Q2VPK5 515 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PLAG1Q6DJT9 500 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 TUBA3EQ6PEY2 450 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 DCDC5Q6ZRR9 648 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF527Q8NB42 609 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 EID2BQ96D98 161 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 OR1F2PQ96R84 312 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 OR2S2Q9NQN1 319 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 MBD1Q9UIS9 605 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SERTAD3Q9UJW9 196 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PLCL2Q9UPR0 1127 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 NOP16Q9Y3C1 178 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 COQ9O75208 318 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ECDO95905 644 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ADAP00813 363 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF20P17024 532 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CST5P28325 142 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 XCR1P46094 333 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 NKPD1Q17RQ9 610 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 HSD17B12Q53GQ0 312 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF385BQ569K4 471 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 DMRTC1Q5HYR2 192 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 MPP7Q5T2T1 576 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PRAMEF17Q5VTA0 474 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF691Q5VV52 312 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 LHX8Q68G74 356 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CNIH2Q6PI25 160 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 FAM83HQ6ZRV2 1179 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF367Q7RTV3 350 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 C12orf40Q86WS4 652 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CCDC71Q8IV32 467 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 KDM8Q8N371 416 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 OR6Q1Q8NGQ2 317 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 OR2L2Q8NH16 312 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ATOH1Q92858 354 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 FAM46BQ96A09 425 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PDXPQ96GD0 296 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CACNG6Q9BXT2 260 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CPEB1Q9BZB8 566 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SPNS1Q9H2V7 528 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 MAGIXQ9H6Y5 334 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 THSD1Q9NS62 852 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SAGE1Q9NXZ1 904 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SPHK1Q9NYA1 384 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 ENPP5Q9UJA9 477 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 FRMPD3Q5JV73 1810 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 A0A1W2PQ09 198 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 RNASET2O00584 256 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 HPGDSO60760 199 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 LATS1O95835 1130 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 TNFSF8P32971 234 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PCGF2P35227 344 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 RPS27P42677 84 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CSNK1EP49674 416 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CXCR4P61073 352 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SNTA1Q13424 505 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 IHHQ14623 411 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 FBXO46Q6PJ61 603 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 LIMS2Q7Z4I7 341 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PAQR7Q86WK9 346 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 SFTPA1Q8IWL2 248 aa8.55□□□□□ -1.04
SMARCA1-202ENST00000371122 PHC2Q8IXK0 858 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms