RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 IGHV3-20A0A0C4DH32 117 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 OR2W5A6NFC9 320 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 MAGEB17A8MXT2 336 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 CXCR6O00574 342 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 GALR3O60755 368 aaPredicted RBP13.83□□□□□ -0.2
LMO4-201ENST00000370542 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
LMO4-201ENST00000370542 SLC35G6P0C7Q6 338 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 SMIM10L1P0DMW3 83 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 MTHFD2P13995 350 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 MST1P26927 711 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 PSMB9P28065 219 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 AHRP35869 848 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 CCR8P51685 355 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 DIO3P55073 304 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 OLR1P78380 273 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 EXT1Q16394 746 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 ACER2Q5QJU3 275 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 C6orf136Q5SQH8 315 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 TMEM207Q6UWW9 146 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 BTLAQ7Z6A9 289 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 MICU2Q8IYU8 434 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 LGI4Q8N135 537 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 ZNF740Q8NDX6 193 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 MDS2Q8NDY4 140 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 NDNFQ8TB73 568 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 NT5CQ8TCD5 201 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 TMCO6Q96DC7 493 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 SMIM10Q96HG1 83 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 DHRS1Q96LJ7 313 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 ZNF354BQ96LW1 612 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 DCSTAMPQ9H295 470 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
LMO4-201ENST00000370542 ARL15Q9NXU5 204 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 ASIC5Q9NY37 505 aa13.83□□□□□ -0.2
LMO4-201ENST00000370542 PTGES3LE9PB15 166 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 RDH16O75452 317 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 CCNKO75909 580 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 IL6P05231 212 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ALOX12P18054 663 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 IGFBP5P24593 272 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 SOX6P35712 828 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 DDOSTP39656 456 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 IFITM2Q01629 132 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 CD300CQ08708 224 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.2
LMO4-201ENST00000370542 BTBD16Q32M84 506 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 TIMM50Q3ZCQ8 353 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 MINDY4Q4G0A6 757 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 MCEMP1Q8IX19 187 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ASCC1Q8N9N2 400 aaKnown RBP13.82□□□□□ -0.2
LMO4-201ENST00000370542 FNDC5Q8NAU1 212 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 MYDGFQ969H8 173 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 NEIL2Q969S2 332 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 PYCR2Q96C36 320 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 SCMH1Q96GD3 660 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 MED30Q96HR3 178 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ZNF583Q96ND8 569 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 BTBD2Q9BX70 525 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.82□□□□□ -0.26e-8■■■■■ 27.4
LMO4-201ENST00000370542 SIAEQ9HAT2 523 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 SMURF2Q9HAU4 748 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ACOT13Q9NPJ3 140 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 ABCB10Q9NRK6 738 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 PLCXD1Q9NUJ7 323 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 DCAF13Q9NV06 445 aaKnown RBP13.82□□□□□ -0.2
LMO4-201ENST00000370542 CRNNQ9UBG3 495 aaPredicted RBP13.82□□□□□ -0.2
LMO4-201ENST00000370542 IKZF3Q9UKT9 509 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
LMO4-201ENST00000370542 TRAPPC4Q9Y296 219 aa13.82□□□□□ -0.2
LMO4-201ENST00000370542 NAV3Q8IVL0 2385 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SLC28A1O00337 649 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 OR1F1O43749 312 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ZG16O60844 167 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 FAM20BO75063 409 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 DNAJB6O75190 326 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ERN1O75460 977 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 WDR47O94967 919 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ALX3O95076 343 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 F10P00742 488 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 FHP07954 510 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 CD36P16671 472 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 TCEA1P23193 301 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 CASP2P42575 452 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 MAGEA2P43356 314 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 KCNC1P48547 511 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 PGGT1BP53609 377 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 GNG2P59768 71 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 HYAL2Q12891 473 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 TESK1Q15569 626 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 OR4D1Q15615 310 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 CATSPEREQ5SY80 951 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 LAIR2Q6ISS4 152 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 METTL2BQ6P1Q9 378 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 PAPD4Q6PIY7 484 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 MSANTD1Q6ZTZ1 278 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 RPS27LQ71UM5 84 aaKnown RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 KLHDC8AQ8IYD2 350 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms