RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 MAP3K8P41279 467 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 SERPINB4P48594 390 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 MANFP55145 182 aaKnown RBP14.57□□□□□ -0.08
VMA21-202ENST00000370361 HSPB3Q12988 150 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 PDE7AQ13946 482 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 MLC1Q15049 377 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.57□□□□□ -0.08
VMA21-202ENST00000370361 DEFB113Q30KQ7 82 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 KANK2Q63ZY3 851 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 C4orf33Q8N1A6 199 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 MREGQ8N565 214 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 METTL25Q8N6Q8 603 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 ACTRT2Q8TDY3 377 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 DUSP19Q8WTR2 217 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 PARD6BQ9BYG5 372 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 ROPN1BQ9BZX4 212 aaPredicted RBP14.57□□□□□ -0.08
VMA21-202ENST00000370361 C12orf65Q9H3J6 166 aaKnown RBP14.57□□□□□ -0.08
VMA21-202ENST00000370361 PLEKHF2Q9H8W4 249 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 RNF122Q9H9V4 155 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 ROPN1Q9HAT0 212 aaPredicted RBP14.57□□□□□ -0.08
VMA21-202ENST00000370361 FANCFQ9NPI8 374 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 BEX4Q9NWD9 120 aaPredicted RBP14.57□□□□□ -0.08
VMA21-202ENST00000370361 GIN1Q9NXP7 522 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 TESMINQ9Y4I5 508 aa14.57□□□□□ -0.08
VMA21-202ENST00000370361 OR2M5A3KFT3 312 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 C7orf72A4D263 438 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 NPHS1O60500 1241 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 NME6O75414 186 aaPredicted RBP14.56□□□□□ -0.08
VMA21-202ENST00000370361 TGM6O95932 706 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 CD8BP10966 210 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 KLK2P20151 261 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 HPCAL1P37235 193 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 CLEC6AQ6EIG7 209 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 TRABD2AQ86V40 505 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 GPR151Q8TDV0 419 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 ZBTB8AQ96BR9 441 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 STARD4Q96DR4 205 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 APOPT1Q96IL0 206 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 NEUROD4Q9HD90 331 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 MED11Q9P086 117 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 RAB21Q9UL25 225 aa14.56□□□□□ -0.08
VMA21-202ENST00000370361 LSM1O15116 133 aaKnown RBP14.55□□□□□ -0.08
VMA21-202ENST00000370361 NDUFB5O43674 189 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 SMNDC1O75940 238 aaKnown RBP eCLIP14.55□□□□□ -0.08
VMA21-202ENST00000370361 ANGPTL1O95841 491 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 HPGDP15428 266 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 SDC1P18827 310 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 TBXA2RP21731 343 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 CPOXP36551 454 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 CD79BP40259 229 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PRIM2P49643 509 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 IFFO1Q0D2I5 559 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 STX5Q13190 355 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PCLAFQ15004 111 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PRSS53Q2L4Q9 553 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 TMEM44Q2T9K0 475 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 Q6ZSR9 355 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 ZNF551Q7Z340 670 aaPredicted RBP14.55□□□□□ -0.08
VMA21-202ENST00000370361 MARCH3Q86UD3 253 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 C10orf107Q8IVU9 208 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 WDR75Q8IWA0 830 aaKnown RBP14.55□□□□□ -0.08
VMA21-202ENST00000370361 UBQLNLQ8IYU4 475 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 CNEP1R1Q8N9A8 125 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 NUP43Q8NFH3 380 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PGM2Q96G03 612 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 ZNF845Q96IR2 970 aaPredicted RBP14.55□□□□□ -0.08
VMA21-202ENST00000370361 EGLN2Q96KS0 407 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PPP3R2Q96LZ3 170 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 TMEM109Q9BVC6 243 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 PINK1Q9BXM7 581 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 LIME1Q9H400 295 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 UBQLN4Q9NRR5 601 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 GLRX2Q9NS18 164 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 SH3BP4Q9P0V3 963 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 ZNF337Q9Y3M9 751 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 DNAJC15Q9Y5T4 150 aa14.55□□□□□ -0.08
VMA21-202ENST00000370361 SETD2Q9BYW2 2564 aaPredicted RBP14.55□□□□□ -0.08
VMA21-202ENST00000370361 A0A1W2PQD3 144 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 B4DXG7 233 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 H3BML4 177 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 LYPLA1O75608 230 aaPredicted RBP14.54□□□□□ -0.08
VMA21-202ENST00000370361 KRT16P08779 473 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 RFX3P48380 749 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 RPL38P63173 70 aaKnown RBP14.54□□□□□ -0.08
VMA21-202ENST00000370361 SGCBQ16585 318 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 GRAMD1BQ3KR37 738 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 GTPBP8Q8N3Z3 284 aaPredicted RBP14.54□□□□□ -0.08
VMA21-202ENST00000370361 BANPQ8N9N5 519 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 FAM110BQ8TC76 370 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 FAM111AQ96PZ2 611 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 STACQ99469 402 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 PIP5K1AQ99755 562 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 GATA5Q9BWX5 397 aaPredicted RBP14.54□□□□□ -0.08
VMA21-202ENST00000370361 TNFRSF12AQ9NP84 129 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 EQTNQ9NQ60 294 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 DUSP22Q9NRW4 184 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 ATAD3AQ9NVI7 634 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 MCTS1Q9ULC4 181 aaKnown RBP14.54□□□□□ -0.08
VMA21-202ENST00000370361 EMC9Q9Y3B6 208 aa14.54□□□□□ -0.08
VMA21-202ENST00000370361 HRNRQ86YZ3 2850 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms