RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CLK3P49761 638 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 SLC7A2P52569 658 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 ATP12AP54707 1039 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 PSME3P61289 254 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 SLC25A3Q00325 362 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 MAPK11Q15759 364 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 OR5M10Q6IEU7 315 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 SLC30A6Q6NXT4 461 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 APOOLQ6UXV4 268 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 HACD2Q6Y1H2 254 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 ZNF619Q8N2I2 560 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 POGLUT1Q8NBL1 392 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 TMEM19Q96HH6 336 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 HOPXQ9BPY8 73 aaPredicted RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 ZNF350Q9GZX5 532 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 KAT8Q9H7Z6 458 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 A4GALTQ9NPC4 353 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 UBQLN4Q9NRR5 601 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 CMTM6Q9NX76 183 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 THUMPD1Q9NXG2 353 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 GMPR2Q9P2T1 348 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 GMEB1Q9Y692 573 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
TPM3-211ENST00000368531 LAMA5O15230 3695 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 FAM166BA8MTA8 275 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 SNX4O95219 450 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 T-ENOLP0DO92 83 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 ARAFP10398 606 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 BMP2P12643 396 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 AQP1P29972 269 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 CRISP3P54108 245 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 CDK6Q00534 326 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 SCARB2Q14108 478 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 RINLQ6ZS11 566 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 SLC15A3Q8IY34 581 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 ZNF527Q8NB42 609 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 TAAR6Q96RI8 345 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 GPATCH1Q9BRR8 931 aaKnown RBP12.71□□□□□ -0.37
TPM3-211ENST00000368531 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 TSPAN10Q9H1Z9 355 aaPredicted RBP12.71□□□□□ -0.37
TPM3-211ENST00000368531 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 ADA2Q9NZK5 511 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 PPP4R1LQ9P1A2 415 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 PACSIN3Q9UKS6 424 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.37
TPM3-211ENST00000368531 PCDHGB6Q9Y5F9 930 aa12.71□□□□□ -0.37
TPM3-211ENST00000368531 FREM3P0C091 2139 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 C15orf38-AP3S2A0A0A6YYH1 394 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 NPIPB9F8W1W9 429 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 NME4O00746 187 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 NDUFB5O43674 189 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 UGT2B17O75795 530 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 SORBS2O94875 1100 aaKnown RBP12.7□□□□□ -0.38
TPM3-211ENST00000368531 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 CALB2P22676 271 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 LCN1P31025 176 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 GZMMP51124 257 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 MNAT1P51948 309 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 GAS1P54826 345 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 MLLT10P55197 1068 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 LIPEQ05469 1076 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 GNA13Q14344 377 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 TOMM20Q15388 145 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ADRM1Q16186 407 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 MAPK14Q16539 360 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 NDUFAF6Q330K2 333 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
TPM3-211ENST00000368531 C8orf82Q6P1X6 216 aaPredicted RBP12.7□□□□□ -0.38
TPM3-211ENST00000368531 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ARPINQ7Z6K5 226 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 PTOV1Q86YD1 416 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 C11orf65Q8NCR3 313 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 OR1J4Q8NGS1 313 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ZNF597Q96LX8 424 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 FRMD6Q96NE9 622 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 GNRHR2Q96P88 292 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
TPM3-211ENST00000368531 TTTY12Q9BZ98 90 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 TMEM38AQ9H6F2 299 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms