RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FAM26DQ5JW98 314 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 MORN1Q5T089 497 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 LRRTM3Q86VH5 581 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 AQP12AQ8IXF9 295 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 OR10R2Q8NGX6 335 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 PIWIL1Q96J94 861 aaKnown RBP8.19□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF559Q9BR84 538 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 TVP23BQ9NYZ1 205 aa8.19□□□□□ -1.1
SYNE1-206ENST00000367253 FAM237AA0A1B0GTK4 181 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 OR7A17O14581 309 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 BMP6P22004 513 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 DAOAP59103 153 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 EXT1Q16394 746 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 NRROSQ86YC3 692 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF347Q96SE7 839 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 RHOJQ9H4E5 214 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 RHOFQ9HBH0 211 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 LRTM1Q9HBL6 345 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 TESMINQ9Y4I5 508 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 IGKV6D-41A0A0C4DH26 115 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 BUD23O43709 281 aaKnown RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PRAMEF12O95522 483 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SNAI1O95863 264 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 APOA2P02652 100 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 HCKP08631 526 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ANXA4P09525 319 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ADH6P28332 368 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 AGTR1P30556 359 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 HNRNPA3P51991 378 aaKnown RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 DCDP81605 110 aaKnown RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF181Q2M3W8 571 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 RLN3Q8WXF3 142 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SAT2Q96F10 170 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 HYLS1Q96M11 299 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM185BQ9H7F4 350 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 MAN2C1Q9NTJ4 1040 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 KCMF1Q9P0J7 381 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SH2B3Q9UQQ2 575 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 TRAV34A0A0B4J273 112 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 MYBPHLA2RUH7 354 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SLC9B1P1A6NJY1 282 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PIP5K1CO60331 668 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 KCNK2O95069 426 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SLC16A8O95907 504 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 AVPR2P30518 371 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ARL2P36404 184 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 GLP1RP43220 463 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 CRISP3P54108 245 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF169Q14929 603 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PLEKHN1Q494U1 663 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 C1orf185Q5T7R7 199 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SLC26A9Q7LBE3 791 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 TMPRSS9Q7Z410 1059 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 CMTM4Q8IZR5 234 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SNRNP25Q9BV90 132 aaKnown RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 VWA7Q9Y334 891 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 CMAHPQ9Y471 501 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 UGT2A1Q9Y4X1 527 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PCDH17O14917 1159 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF821O75541 412 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 GADD45GO95257 159 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 C2P06681 752 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 GTF2F2P13984 249 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 GSK3BP49841 420 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 POLR2GP62487 172 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PSPHP78330 225 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 HYAL2Q12891 473 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ATP6AP1Q15904 470 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF585AQ6P3V2 769 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 MAMSTRQ6ZN01 415 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 KCTD9Q7L273 389 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SNX29P2Q8IUI4 249 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SLC15A3Q8IY34 581 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 CARFQ8N187 725 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 NXPE1Q8N323 547 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 PCNPQ8WW12 178 aaKnown RBP8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 RELTQ969Z4 430 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 BARHL1Q9BZE3 327 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 DNTTIP1Q9H147 329 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 CTPS2Q9NRF8 586 aa8.18□□□□□ -1.1
SYNE1-206ENST00000367253 SCN7AQ01118 1682 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 KRBOX1C9JBD0 128 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF878C9JN71 531 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 PMM2O15305 246 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 AK1P00568 194 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 PIRTP0C851 137 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ITGB5P18084 799 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CBLP22681 906 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 DLSTP36957 453 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 VEGFCP49767 419 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 P2RX3P56373 397 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 NDUFA6P56556 154 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 RPL11P62913 178 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CHIT1Q13231 466 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CMC1Q7Z7K0 106 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms