RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ZFAND5O76080 213 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 BMP2P12643 396 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 ELK4P28324 431 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 DLSTP36957 453 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 VRK3Q8IV63 474 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 ESX1Q8N693 406 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 FARSAQ9Y285 508 aaKnown RBP10.89□□□□□ -0.67
SYNE1-204ENST00000367248 H3BUI4 141 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 SLCO2B1O94956 709 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 AIFM1O95831 613 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 SLC2A2P11168 524 aaPredicted RBP10.89□□□□□ -0.67
SYNE1-204ENST00000367248 RAB38P57729 211 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 GLT8D1Q68CQ7 371 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 SFXN5Q8TD22 340 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 FOLH1BQ9HBA9 442 aa10.89□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF806P0C7X5 589 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 STARP49675 285 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 HSD11B2P80365 405 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF227Q86WZ6 799 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 TOMM5Q8N4H5 51 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 FER1L6-AS2Q96M78 137 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PINK1Q9BXM7 581 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 KCND3Q9UK17 655 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 F5H5K5 113 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 RAD1O60671 282 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 MITFO75030 526 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CGB2Q6NT52 195 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF367Q7RTV3 350 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF595Q8IYB9 648 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF619Q8N2I2 560 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 OR4K3Q96R72 315 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 RPP25Q9BUL9 199 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 LOC102723532A0A0G2JNH3 316 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 POM121BA6NF01 834 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PNMTP11086 282 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CTXN1P60606 82 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 HOXC5Q00444 222 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 REEP5Q00765 189 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 SLITRK4Q8IW52 837 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CDS1Q92903 461 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 BARD1Q99728 777 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PCDHGA8Q9Y5G5 932 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 HSPE1-MOB4S4R3N1 261 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PRKXP51817 358 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 DCAF7P61962 342 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF404Q494X3 552 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 C1orf53Q5VUE5 145 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 Q6ZNB5 142 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CCDC80Q76M96 950 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZER1Q7Z7L7 766 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 GTF2H4Q92759 462 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 THOC3Q96J01 351 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 NMNAT1Q9HAN9 279 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF749O43361 778 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 APOC1P02654 83 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CDKN2CP42773 168 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ACVR1Q04771 509 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PRKCDQ05655 676 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CNPY1Q3B7I2 92 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ASB18Q6ZVZ8 466 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CYP4V2Q6ZWL3 525 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PDFQ9HBH1 243 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CBLCQ9ULV8 474 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 LCATP04180 440 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 PABPC4LP0CB38 370 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 T-ENOLP0DO92 83 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CKMT1AP12532 417 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 OSMP13725 252 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ADH7P40394 386 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 SRSF5Q13243 272 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 SLC5A12Q1EHB4 618 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 OGFRL1Q5TC84 451 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ASRGL1Q7L266 308 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 LSMEM2Q8N112 164 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF675Q8TD23 568 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 CNN2Q99439 309 aaKnown RBP10.88□□□□□ -0.67
SYNE1-204ENST00000367248 LTB4R2Q9NPC1 389 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 EURLQ9NYK6 297 aa10.88□□□□□ -0.67
SYNE1-204ENST00000367248 ANKRD28O15084 1053 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 WDPCPO95876 746 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 APLNRP35414 380 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 UNQ6126/PRO20091Q6UXV3 157 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MS4A8Q9BY19 250 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 P2RY12Q9H244 342 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 RXFP3Q9NSD7 469 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 FAM118AQ9NWS6 357 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 FAM166BA8MTA8 275 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 AREL1O15033 823 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 HLCSP50747 726 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MGLLQ99685 303 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF701Q9NV72 531 aaPredicted RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 TLCD2A6NGC4 264 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 GPR85P60893 370 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms