RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CCL27Q9Y4X3 112 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ZNF469Q96JG9 3925 aaPredicted RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 TRIM13O60858 407 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 DIAPH2O60879 1101 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 HSPA4LO95757 839 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 NGFRP08138 427 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 CD8BP10966 210 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 POU2F1P14859 743 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 MAPK1P28482 360 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 RPL3P39023 403 aaKnown RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 PON3Q15166 354 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 POU4F3Q15319 338 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 SGCBQ16585 318 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 CLEC6AQ6EIG7 209 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 ZCCHC12Q6PEW1 402 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 ZNF551Q7Z340 670 aaPredicted RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 MARCH3Q86UD3 253 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 OR6Y1Q8NGX8 325 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 TRIM44Q96DX7 344 aaPredicted RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 PGM2Q96G03 612 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 FCRL1Q96LA6 429 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 EML4Q9HC35 981 aaKnown RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 ACSS1Q9NUB1 689 aaPredicted RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 FLNAP21333 2647 aaKnown RBP13.37□□□□□ -0.27
CTSD-202ENST00000367196 ACANP16112 2415 aa13.37□□□□□ -0.27
CTSD-202ENST00000367196 C17orf51A8MQB3 221 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 B4DXG7 233 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 ALG1L2C9J202 215 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 NDUFB5O43674 189 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 NKX2-2O95096 273 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SHBGP04278 402 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 ME2P23368 584 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 HPCAL1P37235 193 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SERPINB4P48594 390 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 PRIM2P49643 509 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 ZNF41P51814 821 aaPredicted RBP13.36□□□□□ -0.27
CTSD-202ENST00000367196 PRKAG1P54619 331 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SIRPAP78324 504 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 ADAM8P78325 824 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTSD-202ENST00000367196 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SHEQ5VZ18 495 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 KANK2Q63ZY3 851 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 VWA1Q6PCB0 445 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 LRIG3Q6UXM1 1119 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
CTSD-202ENST00000367196 RIBC1Q8N443 379 aaPredicted RBP13.36□□□□□ -0.27
CTSD-202ENST00000367196 NUP43Q8NFH3 380 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 FIG4Q92562 907 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 PIK3R3Q92569 461 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 HOXB13Q92826 284 aaPredicted RBP13.36□□□□□ -0.27
CTSD-202ENST00000367196 CAVIN3Q969G5 261 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 ZBTB8AQ96BR9 441 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 PRRG4Q9BZD6 226 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 MKS1Q9NXB0 559 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 SH3BP4Q9P0V3 963 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 PROCRQ9UNN8 238 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 EMC9Q9Y3B6 208 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 FIS1Q9Y3D6 152 aa13.36□□□□□ -0.27
CTSD-202ENST00000367196 NF1P21359 2839 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 GXYLT2A0PJZ3 443 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 C16orf97H3BN30 126 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 SCDO00767 359 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 EIF1AYO14602 144 aaKnown RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 ARHGEF9O43307 516 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 PLGP00747 810 aaPredicted RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 SDC1P18827 310 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 UGT2B10P36537 528 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 CLDN15P56746 228 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 CLDN20P56880 219 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 SLC18A2Q05940 514 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 FAM27E3Q08E93 113 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 PDE7AQ13946 482 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 PCLAFQ15004 111 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 PDSS1Q5T2R2 415 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 FAM214BQ7L5A3 538 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 BTLAQ7Z6A9 289 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 DDIASQ8IXT1 998 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 C4orf33Q8N1A6 199 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 COX18Q8N8Q8 333 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 FNDC9Q8TBE3 224 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 PIGTQ969N2 578 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 APOPT1Q96IL0 206 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms