RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 KLHL13Q9P2N7 655 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 A0A0G2JMP0 313 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 PRAMEF26H0Y7S4 382 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 HNRNPA2B1P22626 353 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 DNAJC22Q8N4W6 341 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 EID2Q8N6I1 236 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR4M2Q8NGB6 313 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 BORCS8Q96FH0 119 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 SH3YL1Q96HL8 342 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 CEPT1Q9Y6K0 416 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 CKMT1AP12532 417 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 FAM205BPQ63HN1 556 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 COL11A1P12107 1806 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 TDRD6O60522 2096 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 F5H0A9 414 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 CDK4P11802 303 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 GSG1LQ6UXU4 331 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR5W2Q8NH69 310 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM163Q8TC26 289 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 SOX17Q9H6I2 414 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 EMC3Q9P0I2 261 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 LHX3Q9UBR4 397 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 ARAFP10398 606 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 FIGLAQ6QHK4 219 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 SSX6Q7RTT6 188 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 KCNK5O95279 499 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 NR4A2P43354 598 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 S100A12P80511 92 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 PCDHGA8Q9Y5G5 932 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 K7ERQ8 282 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 ARL6Q9H0F7 186 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 MKL2Q9ULH7 1088 aa11.36□□□□□ -0.59
CDC42BPA-203ENST00000366766 CLUP10909 449 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 TYRP1P17643 537 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NSDHLQ15738 373 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NADSYN1Q6IA69 706 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 C1QTNF3Q9BXJ4 246 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SACM1LQ9NTJ5 587 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 MRPL3P09001 348 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 PLGLB1Q02325 96 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 MADCAM1Q13477 382 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SPRED3Q2MJR0 410 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 DPY19L2P1Q6NXN4 242 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 PLBD1Q6P4A8 553 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ACOT4Q8N9L9 421 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NEURL3Q96EH8 262 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ERVK13-1Q9NX77 482 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CD8BP10966 210 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 LHCGRP22888 699 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CDNFQ49AH0 187 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR52E2Q8NGJ4 325 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 LPAR4Q99677 370 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 TREX2Q9BQ50 279 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 IFNA2P01563 188 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CD97P48960 835 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF551Q7Z340 670 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 EGFL6Q8IUX8 553 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 A0A1W2PPL8 197 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NPR2P20594 1047 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 DHPSP49366 369 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 HRASLS5Q96KN8 279 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR2M2Q96R28 347 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 APMAPQ9HDC9 416 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 HIF3AQ9Y2N7 669 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CPED1A4D0V7 1026 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 C12orf71A8MTZ7 269 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 DSC1Q08554 894 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 AGAP6Q5VW22 663 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZC3H14Q6PJT7 736 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 GPR26Q8NDV2 337 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 AGAP4Q96P64 663 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 FN3KQ9H479 309 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF831Q5JPB2 1677 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 A8MUA0 341 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SEMA4FO95754 770 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NAA10P41227 235 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 TEKQ02763 1124 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 NKAPLQ5M9Q1 402 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CTSL3PQ5NE16 218 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 WBP2NLQ6ICG8 309 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF852Q6ZMS4 543 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 RHOXF1Q8NHV9 184 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZBTB20Q9HC78 741 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 SEC14L2O76054 403 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CEBPGP53567 150 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 EMX1Q04741 257 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 CCDC86Q9H6F5 360 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-203ENST00000366766 HTR6P50406 440 aa11.34□□□□□ -0.59
CDC42BPA-203ENST00000366766 CDK3Q00526 305 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms