RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CD83Q01151 205 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 TRAM1Q15629 374 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 MICAQ29983 383 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 MFSD9Q8NBP5 474 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 FCAMRQ8WWV6 532 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 CTRCQ99895 268 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 PLEKHM1Q9Y4G2 1056 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 E2F1Q01094 437 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 ZNF829Q3KNS6 432 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-202ENST00000361545 TMEM69Q5SWH9 247 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 ADAMTSL4Q6UY14 1074 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 NANOS1Q8WY41 292 aaKnown RBP17.48■□□□□ 0.39
CLIP2-202ENST00000361545 CCDC115Q96NT0 180 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 IER3IP1Q9Y5U9 82 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 CNTRLQ7Z7A1 2325 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 DLGAP1O14490 977 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 CSF2P04141 144 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 GABRB3P28472 473 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 MAN2A2P49641 1150 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 VRK3Q8IV63 474 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 ZNF442Q9H7R0 627 aa17.48■□□□□ 0.39
CLIP2-202ENST00000361545 MCTS1Q9ULC4 181 aaKnown RBP17.48■□□□□ 0.39
CLIP2-202ENST00000361545 LCATP04180 440 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 GTF2F2P13984 249 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 SLC22A16Q86VW1 577 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CPOQ8IVL8 374 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 C17orf50Q8WW18 174 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 ZMYND19Q96E35 227 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 OR7D2Q96RA2 312 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 RAD1O60671 282 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 RETP07949 1114 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 TRA2BP62995 288 aaKnown RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 RACK1P63244 317 aaKnown RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CPZQ66K79 652 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 FAM160A2Q8N612 972 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CNEP1R1Q8N9A8 125 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 MYADMQ96S97 322 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CSNK1G3Q9Y6M4 447 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 TRAV6A0A075B6T7 132 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 ERCC1P07992 297 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CD63P08962 238 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 ACPPP15309 386 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 TMEM201Q5SNT2 666 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 ZNF584Q8IVC4 421 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 GALNT11Q8NCW6 608 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 DNAAF1Q8NEP3 725 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 KCNN1Q92952 543 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 FKBP10Q96AY3 582 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 PDXPQ96GD0 296 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 TMEM121BQ9BXQ6 578 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 OR51B6Q9H340 312 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 NENFQ9UMX5 172 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 GPR45Q9Y5Y3 372 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 KANTRA0A1W2PQU2 76 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 SOBPA7XYQ1 873 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 E2F3O00716 465 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 CD97P48960 835 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 GOLM1Q8NBJ4 401 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 THAP6Q8TBB0 222 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 ABHD5Q8WTS1 349 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 GPN2Q9H9Y4 310 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-202ENST00000361545 FGF21Q9NSA1 209 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 SACM1LQ9NTJ5 587 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 KNL1Q8NG31 2342 aa17.47■□□□□ 0.39
CLIP2-202ENST00000361545 IGLV3-10A0A075B6K4 115 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 F5H5K5 113 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 PABPC4LP0CB38 370 aaKnown RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 GNRHRP30968 328 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 PGFP49763 221 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 INHBCP55103 352 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 TAZQ16635 292 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 HSF5Q4G112 596 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 VRK2Q86Y07 508 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 MSANTD3Q96H12 275 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 ZNF300Q96RE9 604 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SLC6A7Q99884 636 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 KATNBL1Q9H079 304 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SLC35A3Q9Y2D2 325 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 PCDHGA10Q9Y5H3 936 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 TOGARAM1Q9Y4F4 1720 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SOX3P41225 446 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 VEZF1Q14119 521 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 C6orf106Q9H6K1 298 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 CD93Q9NPY3 652 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 MECP2P51608 486 aaKnown RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 ZMYND11Q15326 602 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SYPL1Q16563 259 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 RUNDC3AQ59EK9 446 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 PIP5KL1Q5T9C9 394 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 ZNF740Q8NDX6 193 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 DENND6BQ8NEG7 585 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SDR9C7Q8NEX9 313 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 TM9SF4Q92544 642 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 SLC25A44Q96H78 314 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 H0Y8X5 98 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 OR2T1O43869 369 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 CD27P26842 260 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms