RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 STT3AP46977 705 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 RGRP47804 291 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 GPR157Q5UAW9 335 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 VRK2Q86Y07 508 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 TRIB3Q96RU7 358 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 C1QTNF6Q9BXI9 259 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 TVP23AA6NH52 213 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 LRRN3E7EW58 273 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 RAB27BO00194 218 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 SLC35F2Q8IXU6 374 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 PIANPQ8IYJ0 282 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 LRRN3Q9H3W5 708 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 ATF4P18848 351 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 ARHGAP12Q8IWW6 846 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 CD200R1Q8TD46 325 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 GLYATL2Q8WU03 294 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 SLC12A9Q9BXP2 914 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 GPR83Q9NYM4 423 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 POLHQ9Y253 713 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 ANKRD34BA5PLL1 514 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 RPE65Q16518 533 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF829Q3KNS6 432 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 ATG9BQ674R7 924 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 PRSS16Q9NQE7 514 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 PCTPQ9UKL6 214 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 C1orf105O95561 183 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 MRPS21P82921 87 aaKnown RBP19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 RPA4Q13156 261 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 FAM189A2Q15884 450 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 AGBL5Q8NDL9 886 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 OR7G3Q8NG95 312 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 SLCO2A1Q92959 643 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 IGSF5Q9NSI5 407 aa19.12■□□□□ 0.65
CDC42BPB-201ENST00000361246 TIMM8AO60220 97 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 CLCN2P51788 898 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 RPL19P84098 196 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 RBBP9O75884 186 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 UGT2B7P16662 529 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF252P-AS1Q0IIN9 211 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 BATF2Q8N1L9 274 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 NR4A3Q92570 626 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 MRPL38Q96DV4 380 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KATNBL1Q9H079 304 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 SLC25A18Q9H1K4 315 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KLHL13Q9P2N7 655 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 IGHV3-9P01782 118 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 CCR7P32248 378 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 RAB11BQ15907 218 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 H1FXQ92522 213 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 PCDHGA1Q9Y5H4 931 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 FESP07332 822 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 NADSYN1Q6IA69 706 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 RHBDF1Q96CC6 855 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 PLEKHA3Q9HB20 300 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KIR2DS5A0A0G2JLQ3 304 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 A0A0G2JNG1 304 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KIR2DS3K7RE56 304 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 FUT1P19526 365 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KIR2DS5Q14953 304 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF517Q6ZMY9 492 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 KIF18BQ86Y91 864 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 IFI44Q8TCB0 444 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 DECR2Q9NUI1 292 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 CRISP1P54107 249 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 SLC30A2Q9BRI3 323 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 ETAA1Q9NY74 926 aa19.11■□□□□ 0.65
CDC42BPB-201ENST00000361246 TTLL8A6PVC2 850 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZFAND5O76080 213 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 DCKP27707 260 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 PITPNBP48739 271 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 RSC1A1Q92681 617 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF649Q9BS31 505 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 NPR2P20594 1047 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 MBTPS1Q14703 1052 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 C19orf47Q8N9M1 422 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ARL5BQ96KC2 179 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 AIG1Q9NVV5 245 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 MITFO75030 526 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 KDELR2P33947 212 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 SUOXP51687 545 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 FADDQ13158 208 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF431Q8TF32 576 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ARGFXA6NJG6 315 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 SIRT6Q8N6T7 355 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 OR8J3Q8NGG0 315 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 NAT6Q93015 286 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 HOXD1Q9GZZ0 328 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 A0A0G2JPF8 293 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 HNRNPCL3B7ZW38 293 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 TPOP07202 933 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 HNRNPCL4P0DMR1 293 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 PRDX3P30048 256 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 INHBCP55103 352 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 RFT1Q96AA3 541 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 TMEM165Q9HC07 324 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 POT1Q9NUX5 634 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 PLEKHJ1Q9NW61 149 aa19.1■□□□□ 0.65
CDC42BPB-201ENST00000361246 ZNF223Q9UK11 482 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms